Gene PA14_53340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53340 
Symbol 
ID4385303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4727802 
End bp4729814 
Gene Length2013 bp 
Protein Length670 aa 
Translation table11 
GC content64% 
IMG OID639326873 
Producthypothetical protein 
Protein accessionYP_792432 
Protein GI116048768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.19927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGTT CCGCATTCAC CGCGCTCTTG CTGTCCTGCG TCCTGCTGGC GCTCTCCATG 
CCTGCCAGGG CCGACGACCT GCCCTACCGC TTCGGCCTGG GCAAGGCGGA CATCACCGGC
GAAGCCGCCG AAGTCGGCAT GATGGGTTAC TCCTCCCTCG AACAGAAGAC CGCCGGCATC
CACATGCGCC AGTGGGCGCG TGCCTTCGTG ATCGAGGAAG CGGCCAGCGG ACGTCGCCTG
GTCTACGTCA ACACCGACCT GGGGATGATC TTCCAGGCCG TGCACCTGAA GGTCCTGGCC
CGGCTCAAGG CGAAGTACCC CGGTGTCTAC GACGAGAACA ACGTGATGCT CGCCGCCACC
CACACCCACT CCGGTCCGGG CGGCTTCTCC CACTACGCGA TGTACAACCT GTCGGTGCTC
GGCTTCCAGG AAAAGACCTT CAATGCCATC GTCGACGGCA TCGTCCGCTC CATCGAGCGG
GCCCAGGCCA GGTTGCAGCC CGGCCGCCTG TTCTACGGCA GCGGCGAGCT GCGCAACGCC
AGCCGCAACC GTTCGCTGCT GTCGCACCTG AAGAATCCGG ACATCGCCGG CTACGAGGAT
GGCATCGACC CGCAGATGAG CGTGCTCAGC TTCGTCGACG CCAACGGCGA GCTGGCCGGC
GCGATCAGTT GGTTCCCGGT GCACAGCACC TCGATGACCA ACGCCAACCA TCTGATCTCG
CCGGACAACA AGGGCTACGC CTCCTATCAC TGGGAGCACG ACGTCAGCCG CAGGGCCGGT
TTCGTCGCCG CCTTCGCCCA GACCAATGCC GGCAACCTGT CGCCCAACCT GAACCTGAAG
CCCGGCTCCG GTCCCTTCGA CAACGAGTTC GACAACACCC GCGAGATCGG TCTGCGCCAA
TTCGCCAAGG CCTACGAGAT CGCCGGCCAG GCCCAGGAGG AAGTGCTCGG CGAACTGGAT
TCGCGCTTCC GTTTCGTCGA CTTCACCCGC CTGCCGATCC GCCCGGAGTT CACCGACGGC
CAGCCGCGCC AGTTGTGCAC CGCGGCCATC GGCACCAGTC TGGCCGCCGG TAGCACCGAA
GACGGTCCAG GCCCGCTGGG GCTGGATGAA GGCAACAATC CGTTCCTCTC GGCCCTTGGC
GGGTTGCTCA CCGGCGTGCC GCCGCAGGAA CTGGTGCAAT GCCAGGCGGA AAAGACCATC
CTCGCCGACA CCGGCAACAA GAAACCCTAC CCCTGGACGC CGACGGTGCT GCCGATCCAG
ATGTTCCGCA TCGGCCAGTT GGAACTGCTC GGCGCCCCCG CCGAGTTCAC CGTGATGGCC
GGGGTGCGGA TCCGCCGCGC GGTGCAGGCG GCCAGCGAAG CGGCCGGTAT CCGCCATGTG
ATCTTCAATG GCTACGCGAA TGCCTATGCC AGCTACGTCA CCACCCGCGA GGAATACGCC
GCCCAGGAAT ACGAAGGCGG CTCGACCCTC TACGGCCCCT GGACCCAGGC CGCCTACCAG
CAGTTGTTCG TCGACATGGC GGTGGCGCTG CGCGAACGCC TGCCGGTGGA AACCTCGGCG
ATAGCGCCGG ACCTGTCCTG CTGCCAGATG AACTTCCAGA CCGGAGTAGT GGCCGATGAT
CCCTATATCG GCAAGTCCTT CGGCGACGTG TTGCAACAAC CCAGGGAAAG TTATCGCATC
GGCGACAAGG TGACCGTCGC TTTCGTGACC GGACATCCGA AGAATGACTT GCGCACCGAG
AAGACTTTCC TGGAAGTGGT GAATATCGGC AAGGATGGCA AACAGACGCC CGTGACCGTT
GCCACCGATA ATGACTGGTA TACCCAATAC CGCTGGGAGA GAGTGGGTAT ATCTGCCTCG
AAAGCGACTA TCAGCTGGTC CATTCCACCA GGGACCGAGC CCGGCCATTA CTACATCAGG
CACTATGGCA ACGCGAAGAA CTTCTGGACC CAGAAGATCA GCGAAATCGG CGGCTCGACC
CGCTCCTTCG AGGTGCTCGG CACCACTCCC TAG
 
Protein sequence
MSRSAFTALL LSCVLLALSM PARADDLPYR FGLGKADITG EAAEVGMMGY SSLEQKTAGI 
HMRQWARAFV IEEAASGRRL VYVNTDLGMI FQAVHLKVLA RLKAKYPGVY DENNVMLAAT
HTHSGPGGFS HYAMYNLSVL GFQEKTFNAI VDGIVRSIER AQARLQPGRL FYGSGELRNA
SRNRSLLSHL KNPDIAGYED GIDPQMSVLS FVDANGELAG AISWFPVHST SMTNANHLIS
PDNKGYASYH WEHDVSRRAG FVAAFAQTNA GNLSPNLNLK PGSGPFDNEF DNTREIGLRQ
FAKAYEIAGQ AQEEVLGELD SRFRFVDFTR LPIRPEFTDG QPRQLCTAAI GTSLAAGSTE
DGPGPLGLDE GNNPFLSALG GLLTGVPPQE LVQCQAEKTI LADTGNKKPY PWTPTVLPIQ
MFRIGQLELL GAPAEFTVMA GVRIRRAVQA ASEAAGIRHV IFNGYANAYA SYVTTREEYA
AQEYEGGSTL YGPWTQAAYQ QLFVDMAVAL RERLPVETSA IAPDLSCCQM NFQTGVVADD
PYIGKSFGDV LQQPRESYRI GDKVTVAFVT GHPKNDLRTE KTFLEVVNIG KDGKQTPVTV
ATDNDWYTQY RWERVGISAS KATISWSIPP GTEPGHYYIR HYGNAKNFWT QKISEIGGST
RSFEVLGTTP