Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53340 |
Symbol | |
ID | 4385303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4727802 |
End bp | 4729814 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639326873 |
Product | hypothetical protein |
Protein accession | YP_792432 |
Protein GI | 116048768 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.19927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACGTT CCGCATTCAC CGCGCTCTTG CTGTCCTGCG TCCTGCTGGC GCTCTCCATG CCTGCCAGGG CCGACGACCT GCCCTACCGC TTCGGCCTGG GCAAGGCGGA CATCACCGGC GAAGCCGCCG AAGTCGGCAT GATGGGTTAC TCCTCCCTCG AACAGAAGAC CGCCGGCATC CACATGCGCC AGTGGGCGCG TGCCTTCGTG ATCGAGGAAG CGGCCAGCGG ACGTCGCCTG GTCTACGTCA ACACCGACCT GGGGATGATC TTCCAGGCCG TGCACCTGAA GGTCCTGGCC CGGCTCAAGG CGAAGTACCC CGGTGTCTAC GACGAGAACA ACGTGATGCT CGCCGCCACC CACACCCACT CCGGTCCGGG CGGCTTCTCC CACTACGCGA TGTACAACCT GTCGGTGCTC GGCTTCCAGG AAAAGACCTT CAATGCCATC GTCGACGGCA TCGTCCGCTC CATCGAGCGG GCCCAGGCCA GGTTGCAGCC CGGCCGCCTG TTCTACGGCA GCGGCGAGCT GCGCAACGCC AGCCGCAACC GTTCGCTGCT GTCGCACCTG AAGAATCCGG ACATCGCCGG CTACGAGGAT GGCATCGACC CGCAGATGAG CGTGCTCAGC TTCGTCGACG CCAACGGCGA GCTGGCCGGC GCGATCAGTT GGTTCCCGGT GCACAGCACC TCGATGACCA ACGCCAACCA TCTGATCTCG CCGGACAACA AGGGCTACGC CTCCTATCAC TGGGAGCACG ACGTCAGCCG CAGGGCCGGT TTCGTCGCCG CCTTCGCCCA GACCAATGCC GGCAACCTGT CGCCCAACCT GAACCTGAAG CCCGGCTCCG GTCCCTTCGA CAACGAGTTC GACAACACCC GCGAGATCGG TCTGCGCCAA TTCGCCAAGG CCTACGAGAT CGCCGGCCAG GCCCAGGAGG AAGTGCTCGG CGAACTGGAT TCGCGCTTCC GTTTCGTCGA CTTCACCCGC CTGCCGATCC GCCCGGAGTT CACCGACGGC CAGCCGCGCC AGTTGTGCAC CGCGGCCATC GGCACCAGTC TGGCCGCCGG TAGCACCGAA GACGGTCCAG GCCCGCTGGG GCTGGATGAA GGCAACAATC CGTTCCTCTC GGCCCTTGGC GGGTTGCTCA CCGGCGTGCC GCCGCAGGAA CTGGTGCAAT GCCAGGCGGA AAAGACCATC CTCGCCGACA CCGGCAACAA GAAACCCTAC CCCTGGACGC CGACGGTGCT GCCGATCCAG ATGTTCCGCA TCGGCCAGTT GGAACTGCTC GGCGCCCCCG CCGAGTTCAC CGTGATGGCC GGGGTGCGGA TCCGCCGCGC GGTGCAGGCG GCCAGCGAAG CGGCCGGTAT CCGCCATGTG ATCTTCAATG GCTACGCGAA TGCCTATGCC AGCTACGTCA CCACCCGCGA GGAATACGCC GCCCAGGAAT ACGAAGGCGG CTCGACCCTC TACGGCCCCT GGACCCAGGC CGCCTACCAG CAGTTGTTCG TCGACATGGC GGTGGCGCTG CGCGAACGCC TGCCGGTGGA AACCTCGGCG ATAGCGCCGG ACCTGTCCTG CTGCCAGATG AACTTCCAGA CCGGAGTAGT GGCCGATGAT CCCTATATCG GCAAGTCCTT CGGCGACGTG TTGCAACAAC CCAGGGAAAG TTATCGCATC GGCGACAAGG TGACCGTCGC TTTCGTGACC GGACATCCGA AGAATGACTT GCGCACCGAG AAGACTTTCC TGGAAGTGGT GAATATCGGC AAGGATGGCA AACAGACGCC CGTGACCGTT GCCACCGATA ATGACTGGTA TACCCAATAC CGCTGGGAGA GAGTGGGTAT ATCTGCCTCG AAAGCGACTA TCAGCTGGTC CATTCCACCA GGGACCGAGC CCGGCCATTA CTACATCAGG CACTATGGCA ACGCGAAGAA CTTCTGGACC CAGAAGATCA GCGAAATCGG CGGCTCGACC CGCTCCTTCG AGGTGCTCGG CACCACTCCC TAG
|
Protein sequence | MSRSAFTALL LSCVLLALSM PARADDLPYR FGLGKADITG EAAEVGMMGY SSLEQKTAGI HMRQWARAFV IEEAASGRRL VYVNTDLGMI FQAVHLKVLA RLKAKYPGVY DENNVMLAAT HTHSGPGGFS HYAMYNLSVL GFQEKTFNAI VDGIVRSIER AQARLQPGRL FYGSGELRNA SRNRSLLSHL KNPDIAGYED GIDPQMSVLS FVDANGELAG AISWFPVHST SMTNANHLIS PDNKGYASYH WEHDVSRRAG FVAAFAQTNA GNLSPNLNLK PGSGPFDNEF DNTREIGLRQ FAKAYEIAGQ AQEEVLGELD SRFRFVDFTR LPIRPEFTDG QPRQLCTAAI GTSLAAGSTE DGPGPLGLDE GNNPFLSALG GLLTGVPPQE LVQCQAEKTI LADTGNKKPY PWTPTVLPIQ MFRIGQLELL GAPAEFTVMA GVRIRRAVQA ASEAAGIRHV IFNGYANAYA SYVTTREEYA AQEYEGGSTL YGPWTQAAYQ QLFVDMAVAL RERLPVETSA IAPDLSCCQM NFQTGVVADD PYIGKSFGDV LQQPRESYRI GDKVTVAFVT GHPKNDLRTE KTFLEVVNIG KDGKQTPVTV ATDNDWYTQY RWERVGISAS KATISWSIPP GTEPGHYYIR HYGNAKNFWT QKISEIGGST RSFEVLGTTP
|
| |