| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_53260 |
|---|
| Symbol | |
|---|
| ID | 4385309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4721128 |
|---|
| End bp | 4722090 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639326867 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792426 |
|---|
| Protein GI | 116048774 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.845489 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTTT CTCTCGCCTC CCTCCAACAA GCCGCCGCCA TCGTCCACCA GAGCCTGCCG
CCGACGCCGC AGATACGCTG GCCACTGCTA TGCGAGGCAC TGGGTTGCGA AGTGTGGATG
AAGCACGAGA ACCACCTGCC GGTGGGGGCC TTCAAGCTGC GCGGCGGCCT GGTGTATTTC
CACCACCTGG CGCACCAGGG TGAGCGGCCG GCCGGCGTGA TCAGCGCCAC CCGCGGCAAC
CACGGCCAGT CGGTGGCCTT CTCGGCGAGC CGCTACGGCA TCCAGCCGAT CATCGTCGTG
CCGCACGGCA ACAGCCGCGA GAAGAACGCG GCGATGCGCA GCCTCGGCGC GGAGCTGATC
GAGCATGGCG AGGACTTCCA GGCCTCCCGC GAATACGCCG CCGAGCGCGC CCGGCACGAA
GGCCTGCACC TGATTCCGGC GTTCCATCCC TGGCTGGTGG CCGGGGTCGC CAGCTACAGC
CTGGAGTTGT TCGCCGCGCT GGCCGACCTT GACGAAGTCT ACGTGCCGAT CGGTATGGGT
TCGGGCATCT GCGGCCTGAT CGCCGCGCGC GACGCGCTGG GCCTGAAGAC CCGCATCGTC
GGCGTGGTGT CCGCCCATGC GCCGGCCTAC GCCCTGTCGT TCGAGGCCGG CACGGCGATC
AGCCACCCGG TCGACACCCG CCTGGCCGAC GGCATGGCGT GCAGTACGCC GGACCCGAGC
GCGCTGGAAA TGATCCTGGC CGGCGCCGAT CGCCTGGTGC GGGTCAGCGA CAGGGAGATC
GGCGCGGCCA TGCGCCTGTG CTTCACCAGC ACCCACAACG TCGCCGAGGG CGCCGGGGTG
GCGGCGCTGG CCGCCGCCTG GCAGGAGCGC GAGCGCCTGA AGGGGCTGAA GGTAGGCCTG
ATCCTCAGCG GAGCGAACGT CGACCGCGAG GTATTCGCCG AGCAACTGGC CGCCGGCGAC
TGA
|
|---|
| Protein sequence | MPFSLASLQQ AAAIVHQSLP PTPQIRWPLL CEALGCEVWM KHENHLPVGA FKLRGGLVYF
HHLAHQGERP AGVISATRGN HGQSVAFSAS RYGIQPIIVV PHGNSREKNA AMRSLGAELI
EHGEDFQASR EYAAERARHE GLHLIPAFHP WLVAGVASYS LELFAALADL DEVYVPIGMG
SGICGLIAAR DALGLKTRIV GVVSAHAPAY ALSFEAGTAI SHPVDTRLAD GMACSTPDPS
ALEMILAGAD RLVRVSDREI GAAMRLCFTS THNVAEGAGV AALAAAWQER ERLKGLKVGL
ILSGANVDRE VFAEQLAAGD
|
|---|
| |