Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53090 |
Symbol | |
ID | 4382843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4706093 |
End bp | 4706881 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639326853 |
Product | transcriptional regulator |
Protein accession | YP_792412 |
Protein GI | 116048788 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGAC CCGCCCCACC CGACCTGAGC GACAGCCGCC GGCCCCTGCG CGGCGTCGCC CGCAGCTATC CTGCCGGGCA CCGCGTCGAT GCCCACGAGC ACGCCTGGGG CCAGGTGCTC TATGCGGTGT CCGGGATGAT GTGGCTGGAG ACGCCCGACG AGGCCCTGCC GGTCCCGCCG CAACGGGCGG TCTGGTTGCC TCCGGGCCTG CGCCATGCGG TGCGGATCGC GTCCGAGTTG CAGATGCGCA ACATCTACCT GAGCCCGGAA CTCTCCCGCG GCCTGGAGGA CCGCACCCTG GTGCTGGTGG TCGGCCCGCT GCTGCGCGAG CTGATCGTCA GCCTGGTGGA GCAGGAACGA CAGAGCGACC CCCACTACTA TCGGGCGCTG GCCGATCTCG CCGTGCTCGA ACTCGGTCGC GCGCGCCGTT CCAGCCTCCG CGTACCGCTG CCGGACGCCT CCGACAGGCG CCTGCTCGCG CTGTGCCAGG CGGTGATGGC CAATCCCTCC CTGGACATCG GCCTGGAGCG CCTGGCCGAA GACGCCGGGG CCAGCGTGCG GACCCTCTCG CGCCTGTTCC AGCGCAGCCT GGGCATGGGC TTCGCCGACT GGCGGCGGCA GGTGCAACTG GCGACCGCCG CCGCCGCACT GATCGATGGC CGTCCGGTGG CGGGCATCGC CCATGCCCTG GGATATACGC CGAGCGCCTT CAGCGACATG TTCCGCCGCG AGCTGGGCGT CTCTCCCACC GAGTACAGGG CCGAGCATCA CCAGCCGTTC CAGCCTTGA
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Protein sequence | MARPAPPDLS DSRRPLRGVA RSYPAGHRVD AHEHAWGQVL YAVSGMMWLE TPDEALPVPP QRAVWLPPGL RHAVRIASEL QMRNIYLSPE LSRGLEDRTL VLVVGPLLRE LIVSLVEQER QSDPHYYRAL ADLAVLELGR ARRSSLRVPL PDASDRRLLA LCQAVMANPS LDIGLERLAE DAGASVRTLS RLFQRSLGMG FADWRRQVQL ATAAAALIDG RPVAGIAHAL GYTPSAFSDM FRRELGVSPT EYRAEHHQPF QP
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