Gene PA14_53090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53090 
Symbol 
ID4382843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4706093 
End bp4706881 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content72% 
IMG OID639326853 
Producttranscriptional regulator 
Protein accessionYP_792412 
Protein GI116048788 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAC CCGCCCCACC CGACCTGAGC GACAGCCGCC GGCCCCTGCG CGGCGTCGCC 
CGCAGCTATC CTGCCGGGCA CCGCGTCGAT GCCCACGAGC ACGCCTGGGG CCAGGTGCTC
TATGCGGTGT CCGGGATGAT GTGGCTGGAG ACGCCCGACG AGGCCCTGCC GGTCCCGCCG
CAACGGGCGG TCTGGTTGCC TCCGGGCCTG CGCCATGCGG TGCGGATCGC GTCCGAGTTG
CAGATGCGCA ACATCTACCT GAGCCCGGAA CTCTCCCGCG GCCTGGAGGA CCGCACCCTG
GTGCTGGTGG TCGGCCCGCT GCTGCGCGAG CTGATCGTCA GCCTGGTGGA GCAGGAACGA
CAGAGCGACC CCCACTACTA TCGGGCGCTG GCCGATCTCG CCGTGCTCGA ACTCGGTCGC
GCGCGCCGTT CCAGCCTCCG CGTACCGCTG CCGGACGCCT CCGACAGGCG CCTGCTCGCG
CTGTGCCAGG CGGTGATGGC CAATCCCTCC CTGGACATCG GCCTGGAGCG CCTGGCCGAA
GACGCCGGGG CCAGCGTGCG GACCCTCTCG CGCCTGTTCC AGCGCAGCCT GGGCATGGGC
TTCGCCGACT GGCGGCGGCA GGTGCAACTG GCGACCGCCG CCGCCGCACT GATCGATGGC
CGTCCGGTGG CGGGCATCGC CCATGCCCTG GGATATACGC CGAGCGCCTT CAGCGACATG
TTCCGCCGCG AGCTGGGCGT CTCTCCCACC GAGTACAGGG CCGAGCATCA CCAGCCGTTC
CAGCCTTGA
 
Protein sequence
MARPAPPDLS DSRRPLRGVA RSYPAGHRVD AHEHAWGQVL YAVSGMMWLE TPDEALPVPP 
QRAVWLPPGL RHAVRIASEL QMRNIYLSPE LSRGLEDRTL VLVVGPLLRE LIVSLVEQER
QSDPHYYRAL ADLAVLELGR ARRSSLRVPL PDASDRRLLA LCQAVMANPS LDIGLERLAE
DAGASVRTLS RLFQRSLGMG FADWRRQVQL ATAAAALIDG RPVAGIAHAL GYTPSAFSDM
FRRELGVSPT EYRAEHHQPF QP