Gene PA14_52850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52850 
Symbol 
ID4385587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4685179 
End bp4686006 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID639326834 
Productacyl-CoA lyase beta chain 
Protein accessionYP_792393 
Protein GI116048807 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0557827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAC AAATCGTGCG CAGCGCGCTG TTCGTCCCGG CGACCCGCCC GGAGCGGATC 
CCCAAGGCCC TTGCCAGCGG CGCCGACCGG GTCATCGTCG ACCTCGAGGA TGCGGTGGAG
GAGGGGCTGA AGGTCGAGGC GCGGGCCAAT CTCCGGCGTT TCCTCGTCGA TACGCCGGAA
GCCCGGGTGC TGGTGCGGAT CAACGCGGCG GAGCATCCCG GACATGCCGA CGACCTGGCG
CTGTGCCGCG ACCACGCCGG AGTGATCGGC CTGCTCCTGC CGAAAGTGGA GAGCGCCGCC
CAGGTGCGCC ACGCCGCCGT GGCCAGCGGC AAGCCGGTCT GGCCCATCGT CGAGAGTGCC
CGCGGCCTTG CCGCGCTGGG CGAGATCGCC GCCGCCGCGG GGGTCGAGCG GCTGTCCTTC
GGCAGCCTCG ACCTGGCCCT GGATCTCGAT CTCAACAGCG GCAGCAACGC AGCCGAACAG
ATTCTCGGTC ACGCCCGTTA CGCGCTGCTC CTGCAATCGC GCCTGGCAGG CCTGGCGCCG
CCGCTGGACG GCGTCTACCC GGCGATCCAG AACCGTGTCG GACTGGTCGA GGCAGTGCGC
TTCGCTCGCG ACATGGGCTT CGGCGGGTTG CTGTGCATCC ATCCGAGCCA GGTCGAGCCG
ATCCACCAGA CATTGATGCC GAGTCTCGCG GAACTGGAGT GGGCGCGTCG GGTGGCAGAG
GCCGGCGCCT CCGGTGCCGG CGTCTTCGTG GTCGACGGCG AGATGGTCGA CGCGCCGGTG
CTGGGACGCG CGCGACGCCT GCTGGAGCGG GCCGGGGAGG GTGGCTGA
 
Protein sequence
MNRQIVRSAL FVPATRPERI PKALASGADR VIVDLEDAVE EGLKVEARAN LRRFLVDTPE 
ARVLVRINAA EHPGHADDLA LCRDHAGVIG LLLPKVESAA QVRHAAVASG KPVWPIVESA
RGLAALGEIA AAAGVERLSF GSLDLALDLD LNSGSNAAEQ ILGHARYALL LQSRLAGLAP
PLDGVYPAIQ NRVGLVEAVR FARDMGFGGL LCIHPSQVEP IHQTLMPSLA ELEWARRVAE
AGASGAGVFV VDGEMVDAPV LGRARRLLER AGEGG