Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52850 |
Symbol | |
ID | 4385587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4685179 |
End bp | 4686006 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639326834 |
Product | acyl-CoA lyase beta chain |
Protein accession | YP_792393 |
Protein GI | 116048807 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0557827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGAC AAATCGTGCG CAGCGCGCTG TTCGTCCCGG CGACCCGCCC GGAGCGGATC CCCAAGGCCC TTGCCAGCGG CGCCGACCGG GTCATCGTCG ACCTCGAGGA TGCGGTGGAG GAGGGGCTGA AGGTCGAGGC GCGGGCCAAT CTCCGGCGTT TCCTCGTCGA TACGCCGGAA GCCCGGGTGC TGGTGCGGAT CAACGCGGCG GAGCATCCCG GACATGCCGA CGACCTGGCG CTGTGCCGCG ACCACGCCGG AGTGATCGGC CTGCTCCTGC CGAAAGTGGA GAGCGCCGCC CAGGTGCGCC ACGCCGCCGT GGCCAGCGGC AAGCCGGTCT GGCCCATCGT CGAGAGTGCC CGCGGCCTTG CCGCGCTGGG CGAGATCGCC GCCGCCGCGG GGGTCGAGCG GCTGTCCTTC GGCAGCCTCG ACCTGGCCCT GGATCTCGAT CTCAACAGCG GCAGCAACGC AGCCGAACAG ATTCTCGGTC ACGCCCGTTA CGCGCTGCTC CTGCAATCGC GCCTGGCAGG CCTGGCGCCG CCGCTGGACG GCGTCTACCC GGCGATCCAG AACCGTGTCG GACTGGTCGA GGCAGTGCGC TTCGCTCGCG ACATGGGCTT CGGCGGGTTG CTGTGCATCC ATCCGAGCCA GGTCGAGCCG ATCCACCAGA CATTGATGCC GAGTCTCGCG GAACTGGAGT GGGCGCGTCG GGTGGCAGAG GCCGGCGCCT CCGGTGCCGG CGTCTTCGTG GTCGACGGCG AGATGGTCGA CGCGCCGGTG CTGGGACGCG CGCGACGCCT GCTGGAGCGG GCCGGGGAGG GTGGCTGA
|
Protein sequence | MNRQIVRSAL FVPATRPERI PKALASGADR VIVDLEDAVE EGLKVEARAN LRRFLVDTPE ARVLVRINAA EHPGHADDLA LCRDHAGVIG LLLPKVESAA QVRHAAVASG KPVWPIVESA RGLAALGEIA AAAGVERLSF GSLDLALDLD LNSGSNAAEQ ILGHARYALL LQSRLAGLAP PLDGVYPAIQ NRVGLVEAVR FARDMGFGGL LCIHPSQVEP IHQTLMPSLA ELEWARRVAE AGASGAGVFV VDGEMVDAPV LGRARRLLER AGEGG
|
| |