Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52530 |
Symbol | |
ID | 4383137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4659047 |
End bp | 4659760 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326808 |
Product | transcriptional regulator |
Protein accession | YP_792370 |
Protein GI | 116048830 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000132202 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCA AAGATCGCAT CAAGGCGGCG CGCAAGCACG CCCATCTCAG CCAGGTCCAG CTTGCCCAGG CGGTAGGCAT GACCCAGACC TCCATTTCCG ATCTGGAGCG CGGCAAGTCC CGCGCCACCA GCTTCGTCGC GCAGATCGCC GGCGCCTGCG GCGTCAACCC CCTGTGGCTG GCGGAAGGTC GCGGCGAGAT GCTCGCCGAG CGCGGCCAGG CGAACGCAGG ACCCAATGCC AGTTGGCTTG GCGCAGTAGA GTCATGGGAC GACGAAACGC CCCTGGATGC CGACGAGATC GAACTGCCCT TCTACAAGGA GATCGAGCTG TCCGGCGGCA AGGGCAGCAC GGTGATCCTG CAGACCGGCG GGCGCAAGCT GCGCTTCGGC AAGTACACCC TGCGCAAGAA GAACATCGAT CCGGCCAGTG CCGCCTGCGT CACGGTCAGC GGCAACAGCA TGGAGCCGGT GCTGCCGGAC GGCAGCACGG TAGGCGTGGA CACTAGCGCG CGGACGATCA AGGACGGCGA CATGTACGCC TTCGACCACG ACGGCCAACT GCGCGTGAAA CTGCTCTACC GCCTTCCGGG CGGCGGCCTG CGCATTCGCA GCTTCAACAG CGACGAGCAC CCGGACGAGC GCTACGAGCC CCAGGAAGCC GCCGAGCACA TCAACGTGAT CGGCCGGGTG TTCTGGTACT CGGTGCTGGT CTGA
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Protein sequence | MELKDRIKAA RKHAHLSQVQ LAQAVGMTQT SISDLERGKS RATSFVAQIA GACGVNPLWL AEGRGEMLAE RGQANAGPNA SWLGAVESWD DETPLDADEI ELPFYKEIEL SGGKGSTVIL QTGGRKLRFG KYTLRKKNID PASAACVTVS GNSMEPVLPD GSTVGVDTSA RTIKDGDMYA FDHDGQLRVK LLYRLPGGGL RIRSFNSDEH PDERYEPQEA AEHINVIGRV FWYSVLV
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