Gene PA14_52530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52530 
Symbol 
ID4383137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4659047 
End bp4659760 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID639326808 
Producttranscriptional regulator 
Protein accessionYP_792370 
Protein GI116048830 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000132202 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA AAGATCGCAT CAAGGCGGCG CGCAAGCACG CCCATCTCAG CCAGGTCCAG 
CTTGCCCAGG CGGTAGGCAT GACCCAGACC TCCATTTCCG ATCTGGAGCG CGGCAAGTCC
CGCGCCACCA GCTTCGTCGC GCAGATCGCC GGCGCCTGCG GCGTCAACCC CCTGTGGCTG
GCGGAAGGTC GCGGCGAGAT GCTCGCCGAG CGCGGCCAGG CGAACGCAGG ACCCAATGCC
AGTTGGCTTG GCGCAGTAGA GTCATGGGAC GACGAAACGC CCCTGGATGC CGACGAGATC
GAACTGCCCT TCTACAAGGA GATCGAGCTG TCCGGCGGCA AGGGCAGCAC GGTGATCCTG
CAGACCGGCG GGCGCAAGCT GCGCTTCGGC AAGTACACCC TGCGCAAGAA GAACATCGAT
CCGGCCAGTG CCGCCTGCGT CACGGTCAGC GGCAACAGCA TGGAGCCGGT GCTGCCGGAC
GGCAGCACGG TAGGCGTGGA CACTAGCGCG CGGACGATCA AGGACGGCGA CATGTACGCC
TTCGACCACG ACGGCCAACT GCGCGTGAAA CTGCTCTACC GCCTTCCGGG CGGCGGCCTG
CGCATTCGCA GCTTCAACAG CGACGAGCAC CCGGACGAGC GCTACGAGCC CCAGGAAGCC
GCCGAGCACA TCAACGTGAT CGGCCGGGTG TTCTGGTACT CGGTGCTGGT CTGA
 
Protein sequence
MELKDRIKAA RKHAHLSQVQ LAQAVGMTQT SISDLERGKS RATSFVAQIA GACGVNPLWL 
AEGRGEMLAE RGQANAGPNA SWLGAVESWD DETPLDADEI ELPFYKEIEL SGGKGSTVIL
QTGGRKLRFG KYTLRKKNID PASAACVTVS GNSMEPVLPD GSTVGVDTSA RTIKDGDMYA
FDHDGQLRVK LLYRLPGGGL RIRSFNSDEH PDERYEPQEA AEHINVIGRV FWYSVLV