| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_52130 |
|---|
| Symbol | |
|---|
| ID | 4383110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4622057 |
|---|
| End bp | 4623385 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639326775 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792338 |
|---|
| Protein GI | 116048861 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3765] Chain length determinant protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.986693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0266554 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCCT CACAGCTTCC GGGGGCTTCG CCCTCGGAGA TCGATATCGT TCAGCTGTTC
CAGCAATTGT GGGCGTCGAA GTGGCTGATA GCGCTGATCG CGGCCTTGGC GACCGCCGCT
GCGCTCGCCT ACGCGCTGTT GGCCGTTCCG ACCTACCAGG TGGATGTCCT GTTGCGGCCG
ATCCAGACCA AGGCCCTGGA GGCTGTCAAT GTCAAGGGGC TGTATGCCCT GACTCCGCGG
GAAGCGCTGG ATCGCGTCGG CAACGAGCTG GCAGCCTACT CCGGCAGGCT GGAGTATTTC
GAAGCCCATC CAGAGCTATT CCAGCAATTG AACGCCGAGG GCCTGTCCCC CGAGCAGGCT
TTCTGGAAGT TCAACCAGGA TGCCTTCAGC ATGCAGCAGG CGGACTTGAA GAAGGACCCC
CAGGCGGCGC CTTTCTTCCG CTTGTCCATG CAGTATCCCC AGGGCATGGA TGGTGCCGCC
ATTCTCAACG GCATGCTCGC GTCGACCATC GAGAACGAGC GCCAGCGAAT CCTGGACGAC
CTCCAGGCAC GTATCGACGG TCGCCTGCAA TTCCTCGAGC AGGATATCGA AGGCAAGCGT
GCCAGTTACC AGGCTACCAA GGAGGGCAAG ATCGCCCGGT TGCTGGAAGC GGACAGCATC
CGGCGGGCTG GCTTGGAGGA TGAGCTCAAG GCGTTGCGCG GGCGGCTGAA GATGGTGCGC
GACTCGCGTA TCCAGCAGCT CAACGAGGCT ATCCAGATCG CCACCCGGCT GGGGATCGTC
AAGCCGACGA CCCCGGGCGC ACTGGGAGAG GTCGGGCAGG ATGGCTCGCG CAGCGTTTTC
CGCACCGAGG TGAATAACCA GCAGATTCCC CTGTATTTCA TGGGTGTCGA TGCCTTGACC
GCCGAGCGCG ATACCTTGCT CAAGCGCAAG GGCGATGACT TCACCGAGCC CCGCGTGGCG
AAGATCCAGC AGGAGCTGAG GCAGCTGGAG AACAACCGTG AAGTGCAATA CCTGCAGGCT
CGAAAGGGCG AGGAGCGTTT CTTCGAAAAC ATCGACAAGC TGCGTGGAGA GCAGGCGCGC
CTCAAGACTC TGAAGGCGAG CGAGCTGAAG ATCGAACTGG TGCGGATCGA CCAGAAGGCT
TCGACCCCTC TGAAACCCAT CAAGCCGCGC AAGGCCTTGG TGGTGGCCTT GGGCCTCCTG
GGCGGGTTGG TGTTCGGCGT GCTGGTGGCT CTGGTTCGGG CAATGTTGCG TGCCCCTCGG
CAACGGGTAC AGGAAGATAG CCTGCCGCCG GGAGTCGTCA GTCTCGACCG GAGCCTTTCG
GGGACCTGA
|
|---|
| Protein sequence | MPSSQLPGAS PSEIDIVQLF QQLWASKWLI ALIAALATAA ALAYALLAVP TYQVDVLLRP
IQTKALEAVN VKGLYALTPR EALDRVGNEL AAYSGRLEYF EAHPELFQQL NAEGLSPEQA
FWKFNQDAFS MQQADLKKDP QAAPFFRLSM QYPQGMDGAA ILNGMLASTI ENERQRILDD
LQARIDGRLQ FLEQDIEGKR ASYQATKEGK IARLLEADSI RRAGLEDELK ALRGRLKMVR
DSRIQQLNEA IQIATRLGIV KPTTPGALGE VGQDGSRSVF RTEVNNQQIP LYFMGVDALT
AERDTLLKRK GDDFTEPRVA KIQQELRQLE NNREVQYLQA RKGEERFFEN IDKLRGEQAR
LKTLKASELK IELVRIDQKA STPLKPIKPR KALVVALGLL GGLVFGVLVA LVRAMLRAPR
QRVQEDSLPP GVVSLDRSLS GT
|
|---|
| |