| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_51470 |
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| Symbol | cupC1 |
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| ID | 4380015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4576015 |
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| End bp | 4576632 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639326715 |
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| Product | fimbrial subunit CupC1 |
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| Protein accession | YP_792279 |
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| Protein GI | 116048920 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00125924 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.000154945 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCATTT CCATGAAAAG CATTCTGGCT GCCGCAGTAG CCAGCCTGGT CGTCGGCAAT
GCCATGGCGG CAGACGGCAC CATCAATTTC AAAGGTGAAA TCACCGCGGC CGCTTGCAGC
ATCACTGGAG GTGCTGGCAC CACCGTTGGC GGTGCAGCGG GCAACCAGAC CATCGACGTA
AACCTCGGCA AGATCAGCAT CGACTCGCTG AGCGGCACCG CGGGCGGCAG CATCGCTGGT
GGTACCAGCC TGAATCTGAA CCTGGACTGT GGCAAGACCG GTACCGGTCT GACCACCGTG
AAGCTGAAGT TCGACCCGAT GTCCGGTACC GGCATCGATT CGCATAACGA AAGCCTGCTG
AAGCTTGGTA AAGACTCCAC TGCCACTGGC GTCGGTATTG GCATCTATGG TTCCGATGGC
AAGCTGCTGA ACCTGTCGGC GAACGAGACC ATTGATGCAC CCTTGAATTC CAGGGTTGAA
AAAGATGGCG AAGGCCAAGA CATCACCCTT TACAGCGCCA ATCTGAATCT GCGGGCTGCT
TACGTAAAGT CTGGCGCTGC GGCCGCTACG GCAGGTGTTG CCAACGGCTC CCTGCCCTTC
ACCCTGGAAT ACAACTAA
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| Protein sequence | MSISMKSILA AAVASLVVGN AMAADGTINF KGEITAAACS ITGGAGTTVG GAAGNQTIDV
NLGKISIDSL SGTAGGSIAG GTSLNLNLDC GKTGTGLTTV KLKFDPMSGT GIDSHNESLL
KLGKDSTATG VGIGIYGSDG KLLNLSANET IDAPLNSRVE KDGEGQDITL YSANLNLRAA
YVKSGAAAAT AGVANGSLPF TLEYN
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