| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_51420 |
|---|
| Symbol | pqsB |
|---|
| ID | 4379981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4569071 |
|---|
| End bp | 4569922 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639326710 |
|---|
| Product | PqsB |
|---|
| Protein accession | YP_792274 |
|---|
| Protein GI | 116048925 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.000095284 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATTC AGGCTGTGGG GGTGAACCTG CCCCCATCCT ATGTGTGTCT GGAGGGGCCG
CTGGGAGGCG AACGCCCTCG CGCCCAGGGC GACGAGATGC TGATGCAGCG CTTGCTGCCG
GCGGTTCGCG AAGCCCTGGA CGAGGCGGCG GTCAAGCCCG AGGAGATCGA CCTGATCGTC
GGCCTCGCCC TGTCTCCCGA CCATCTGATC GAGAACCGCG ACATCATGGC GCCGAAGATC
GGCCATCCGT TGCAGAAGAT CCTCGGCGCG AATCGCGCCC ATGTCTTCGA CCTCACCGAC
TCGAGCCTGG CTCGCGCCCT CTACGTGGTC GATACCCTCG CCAGCGACCA GGGCTATCGC
AACGTCCTGG TCGTGCGCGG CGAATCCAGC CAGGGATTGG AAGTGGACAG CGAGTCTGGC
TTCGCCCTTG CCGACGGCGC CCTGGCGCTG CTCTGCCGGC CGACCGGCAA GGCCGCGTTC
CGTCGCGGTG CGCTGGGCGG TGATCCGGCG CAGGAATGGC TGCCGCTGAG CATTCCGCTG
AATACCGATA TTCGCCAGGT AGGCGACGTC AAGGGACACC TCAACCTGCC GGCCCAACCT
GGATTGCCCG AAGCGGTACG CGCCGGATTC ACCCGTTTGG CCGGGGACTT CCCGCAACTG
AACTGGGTGC GCGAGGAATG GTTCGGCCAG GGACGGCCCG ATGGTCGTTG CCTGGGGCCG
TTCGAACTGG CGTCGCAACT GCGCGCGGCC CAGCGCGACC GTCTGGATGA ACTGCTGCTG
ATCAGCTTCG ATCCGTTCGG CATGGTGGTG GAGGGCGTGA CCCTGGAACT GGCGGGAGAA
GCTCATGCAT AA
|
|---|
| Protein sequence | MLIQAVGVNL PPSYVCLEGP LGGERPRAQG DEMLMQRLLP AVREALDEAA VKPEEIDLIV
GLALSPDHLI ENRDIMAPKI GHPLQKILGA NRAHVFDLTD SSLARALYVV DTLASDQGYR
NVLVVRGESS QGLEVDSESG FALADGALAL LCRPTGKAAF RRGALGGDPA QEWLPLSIPL
NTDIRQVGDV KGHLNLPAQP GLPEAVRAGF TRLAGDFPQL NWVREEWFGQ GRPDGRCLGP
FELASQLRAA QRDRLDELLL ISFDPFGMVV EGVTLELAGE AHA
|
|---|
| |