Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_50040 |
Symbol | |
ID | 4380074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4447842 |
End bp | 4448621 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639326595 |
Product | transcriptional regulator |
Protein accession | YP_792160 |
Protein GI | 116049038 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.101345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0268029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCGCT ATCCCTACGA ACGGGTCGAG GATCCCGATC TCGCCCGCTG CCCGGTGGTC GGCCTCGAGG TCGACAGCAC CGGCCACCGC AGCGACTGGC ATTGCCACCG GCGCGCGCAG TTGCTGTACA TGGCGGCCGG TAGCGTCACG CTGTATTTCG CCGAGCGCAT TTGCCAATTG ACGTCGCTCC AGGCCGCCTG GCTGCCGGCC GGCGTGCCGC ATCGCACGGT CCTTCACGGG CGCTTCGCCT ACCGTAGCCT GTACTTCGAA CCCTCGGCGT TCGCCGAGCT GCCGGACAGC GTCCAGGTCC TCGAGGTCGG GCCGCTAATG CGCGAACTGA TTCTGCGCAT GACCGGCTGG GCAGCCGACT TGCAATTGGA AGGGCCGCAC CTGACGCTGT TGCGCGCACT GTTCGATGAA CTGGCGAGCG CGCCGGCACA CGCCGCGAGC CTGCCGATGC CGCGCGATGC GCGGGCGCTG AAGGTGGCCG AGGCGCTGCT GGCGCAACCC GCGCTGGACT GGAGCATCGA GGCGTGGGGA CGTGAGGTCG GCGCCAGCGG GCGGACCCTG GCGCGTCTGT TCACCGAGCA GACCGGCCTG GGTTTCTCCC GCTGGCGAAC CCAGGCGCGC TTGTTCGAAG CGCGGAGGCG CCTGGCCGAA GGCCGCTCGG TGACCGAGGT CGCCCACGCC CTGGGCTACG CCAGCGACAG CGCGTTCATC GCCATGTACC GGCGGGTCTG CGGGCAGTCG CCGGGGCGCG CCCTGCGTGG CCTCGAATGA
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Protein sequence | MPRYPYERVE DPDLARCPVV GLEVDSTGHR SDWHCHRRAQ LLYMAAGSVT LYFAERICQL TSLQAAWLPA GVPHRTVLHG RFAYRSLYFE PSAFAELPDS VQVLEVGPLM RELILRMTGW AADLQLEGPH LTLLRALFDE LASAPAHAAS LPMPRDARAL KVAEALLAQP ALDWSIEAWG REVGASGRTL ARLFTEQTGL GFSRWRTQAR LFEARRRLAE GRSVTEVAHA LGYASDSAFI AMYRRVCGQS PGRALRGLE
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