Gene PA14_49870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_49870 
Symbol 
ID4380089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4434110 
End bp4434649 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content67% 
IMG OID639326580 
Productpeptide deformylase 
Protein accessionYP_792145 
Protein GI116049053 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG AAATCCTCAA GATGGGTGAC GAGCGCCTGT TGCGCATTGC GCAGCCGGTG 
CCGTCCGAAC TGCTCGGCAG CGAGGAGCTG CAACGGCTGA TCGACGACAT GTTCGAAACC
ATGCATCACG TCGGCGGGGT AGGGCTGGCC GCGCCGCAGA TCGGCGTCGA CCTGCAACTG
GTGATCTTCG GTTTCGAGCG CAGCGAGCGC TATCCGGACG CCCCGGCCGT GCCGCCGACC
ATCCTGCTGA ACCCGCGGAT CACCCCGCTG GACGACGAGA TGGAAGAGGG CTGGGAGGGC
TGCCTGTCGG TGCCGGGGTT GCGCGGCGCG GTATCGCGCC ATCGGCGCAT CCGCTACCAG
GGCCTGGACC CGCAGGGACA GCCGATCGAC CGCAGCGTCG AAGGGTTCCA TGCGCGGGTG
GTGCAGCACG AGTGCGACCA CCTGATCGGC CGCCTGTATC CCTCGCGAAT CACCGACTTC
AGCAAGTTCG GCTTCACCGA GGTGCTGTTC CCCGACCTGG ACCCCGCCGC GGACGATTGA
 
Protein sequence
MIREILKMGD ERLLRIAQPV PSELLGSEEL QRLIDDMFET MHHVGGVGLA APQIGVDLQL 
VIFGFERSER YPDAPAVPPT ILLNPRITPL DDEMEEGWEG CLSVPGLRGA VSRHRRIRYQ
GLDPQGQPID RSVEGFHARV VQHECDHLIG RLYPSRITDF SKFGFTEVLF PDLDPAADD