Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_49870 |
Symbol | |
ID | 4380089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4434110 |
End bp | 4434649 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326580 |
Product | peptide deformylase |
Protein accession | YP_792145 |
Protein GI | 116049053 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGG AAATCCTCAA GATGGGTGAC GAGCGCCTGT TGCGCATTGC GCAGCCGGTG CCGTCCGAAC TGCTCGGCAG CGAGGAGCTG CAACGGCTGA TCGACGACAT GTTCGAAACC ATGCATCACG TCGGCGGGGT AGGGCTGGCC GCGCCGCAGA TCGGCGTCGA CCTGCAACTG GTGATCTTCG GTTTCGAGCG CAGCGAGCGC TATCCGGACG CCCCGGCCGT GCCGCCGACC ATCCTGCTGA ACCCGCGGAT CACCCCGCTG GACGACGAGA TGGAAGAGGG CTGGGAGGGC TGCCTGTCGG TGCCGGGGTT GCGCGGCGCG GTATCGCGCC ATCGGCGCAT CCGCTACCAG GGCCTGGACC CGCAGGGACA GCCGATCGAC CGCAGCGTCG AAGGGTTCCA TGCGCGGGTG GTGCAGCACG AGTGCGACCA CCTGATCGGC CGCCTGTATC CCTCGCGAAT CACCGACTTC AGCAAGTTCG GCTTCACCGA GGTGCTGTTC CCCGACCTGG ACCCCGCCGC GGACGATTGA
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Protein sequence | MIREILKMGD ERLLRIAQPV PSELLGSEEL QRLIDDMFET MHHVGGVGLA APQIGVDLQL VIFGFERSER YPDAPAVPPT ILLNPRITPL DDEMEEGWEG CLSVPGLRGA VSRHRRIRYQ GLDPQGQPID RSVEGFHARV VQHECDHLIG RLYPSRITDF SKFGFTEVLF PDLDPAADD
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