| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_49360 |
|---|
| Symbol | |
|---|
| ID | 4381693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4385846 |
|---|
| End bp | 4388455 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 869 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639326538 |
|---|
| Product | glucosyl transferase |
|---|
| Protein accession | YP_792103 |
|---|
| Protein GI | 116049095 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG5309] Exo-beta-1,3-glucanase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.169531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.125269 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCAC GCAAGATCGG GCTCAACCTG GTGGTCATCG TCGCCCTGGC CGCCCTCTTC
ACCGGCATCT GGGCCCTGTA CAACCGTCCG GTCAGCGTAC CGGACTGGCC GGAACGCATC
TCCGGCTTCT CCTTCTCGCC GTTCCGCCTC AACCAGAATC CGCAGAGCGG CCGCTACCCC
AGCGCCGAAC AGATGCGCGC CGACCTGGAA CTGGTCGCCC GGCACACCCA CAGCATCCGC
ACCTATTCGG TCCAGGGCGC GCTCGGCGAC ATCCCGGCGC TGGCCGAGGC GTTCGGCCTG
CGCGTCAGCC TGGGCATCTG GCTCGGCCCG GACCTGGCCG GCAACGAGGC CGAGATCGCC
CGCGCCATCC GCATCGCCAA CGAGTCGCCG AGCGTGGTGC GGGTGATAGT CGGCAACGAG
GCGCTGTTCC GCCGCGAGGT GACGGCAGAA CAGTTGATCG CCTACCTCGA CCGGGTCCGC
GCGGCGGTCA AGGTTCCGGT GACCACCGCC GAACAGTGGC ACGTCTACCG CGAACACCCG
GAACTGGCGC AACACGTCGA CCTGATCGCC GCCCACGTCC TGCCCTACTG GGAGGCCACG
CCGGTGGCCG ACGCGGTGGA CTTCGTGCTC GAACGCGCGC GCGAACTCAA GGCCGCCTTC
CCGAGGAAGC CGCTGCTGCT CGCTGAGGTC GGCTGGCCGA GCAACGGGCG CATGCGCGGC
AGCGCCGAGG CGACACCCGC GGACCAGGCC ATCTACCTGC GGCGCCTGAC CAACGCGCTC
AACGGCGAAG GCTACAGCTA CTTCGTCATC GAGGCCTTCG ACCAGCCCTG GAAGGTCAGC
GCCGAAGGCT CGGTGGGCGC CTACTGGGGC GTCTACAACG CCGACCGCAA GGCCAAGTTC
AACTTCACCG GGCCGGTGGT GCCGATTCCC AAGTGGCGCG CCCTGGCCAT CGCCTCGGCG
GTACTCGCGG TACTCGCCTT CACCCTGCTG CTGATCGACA GTTCCTCGCT GCGCCAGCGC
GGGAGGACCT TCCTCGCCGT GGTCTCGTTC GCCTGCGCCT CGGTGCTGGT GTGGATCGCC
TACGACTACA GCCAGCAGTA CAGCACCTGG TTCAGCCTGA CCGTCGGCGC GTTGCTGGGC
GTCGGCGCGC TGGGGGTGGT CATCGTGCTG TTCACCGAGG CCCACGAGCT GGCCGAGGCG
GTCTGGACGC GCAAGCGGCG CCGGCCATTC CTGCCGATCA CCGCCGCGCA GGCCTATCGG
CCCAAGGTGT CGATCCACGT GCCCTGCTAC AACGAGCCGC CGGAACTGCT GAAACAGACC
CTCGACGCCC TCGCCCGCCT CGACTACCCG GACTACGAAG TCCTGGTGAT CGACAACAAC
ACTCGCGACC CGGCCGTCTG GCAGCCGGTC GAGGCGCACT GCGCGCGCCT GGGCGAGCGC
TTCCGCTTCT TCCACGTCGC CCCGCTGGAA GGCTTCAAGG CCGGCGCGCT GAACTTCGCC
CTGGGCCACG TGGCGGCGGA CGTCGAGGTG GTCGCGGTGA TCGACGCCGA CTACTGCGTC
GACCCCGACT GGCTCAGGCA CATGGTGCCG CACTTCGGCG ACCCGCGGAT CGCCGTGGTG
CAGTCGCCGC AGGACTACCG CGACCAGCAC GAGAGCGCCT TCAAGCGGCT CTGCTACGCC
GAGTACAAGG GCTTCTTCCA CATCGGCATG GTCACCCGCA ACGACCGCGA CGCGATCATC
GAGCACGGCA CCATGACCAT GATCCGGCGC AGCGTGCTGG ACGAGCTGAG ATGGCCGGAA
TGGTGCATCA CCGAAGACGC CGAGCTGGGC CTGCGGGTGT TCGAGAAGGG CCTGTCGGCC
GCCTACTTCG AGCGCAGCTA CGGCAAGGGG GTGATGCCCG ATACCTTCAT CGACTTCAAG
AAGCAGCGCT TCCGCTGGGC CTACGGCGCG ATCCAGATCA TGAAGCGGCA TACCGACGCC
CTGCTGCGCG GCCGCGGTCC CGACGGCAGC CGCCTGACCC GCGGCCAGCG CTACCACTTC
GTGGCCGGCT GGCTGCCGTG GATCGCCGAC GGCCTGAACA TCTTCTTCAC CCTCGGCGCG
CTGCTCTGGT CGGCGGCGAT GATCATCGTG CCCAAGCGCG TCGACCCGCC GCTGCTGATC
TTCGCGATCC TGCCGCTGGC CCTGTTCGCC TTCAAGGTCG GCAAGATCCT CTTCCTCTAC
CGGCGCACCG TCGGCGTCGA CCTGCGTGAC TCGTTCTTCG CCGCCCTCGC CGGCCTGTCG
CTCTCGCACA CCATCGCCAA GGCGGTGCTG TACGGCTTCG TCACCCGCGG CATCCCGTTC
TTCCGCACGC CGAAGATGCG CTCCAGCCAC GGCCTGCTGG TGGCCCTGGC GGAGGCCCGC
GAGGAAGTCT TCGTGATGCT CCTGCTGTGG GGCGCGGCGG CCGGCATCGT GGCGGTTCAG
GGCGTGCCGA GCCGCGACCT GCTGATCTGG GTCGCCATGC TCCTGGTGCA ATCGCTGCCC
TACCTGGCGG CGCTGGTCAT GGCCCTGCTC TCGTCGCTGC CGAAACCGCG CGAGGAACTG
GCCGGCGGCG CCGAGCAGAT CGGCGGTTGA
|
|---|
| Protein sequence | MSSRKIGLNL VVIVALAALF TGIWALYNRP VSVPDWPERI SGFSFSPFRL NQNPQSGRYP
SAEQMRADLE LVARHTHSIR TYSVQGALGD IPALAEAFGL RVSLGIWLGP DLAGNEAEIA
RAIRIANESP SVVRVIVGNE ALFRREVTAE QLIAYLDRVR AAVKVPVTTA EQWHVYREHP
ELAQHVDLIA AHVLPYWEAT PVADAVDFVL ERARELKAAF PRKPLLLAEV GWPSNGRMRG
SAEATPADQA IYLRRLTNAL NGEGYSYFVI EAFDQPWKVS AEGSVGAYWG VYNADRKAKF
NFTGPVVPIP KWRALAIASA VLAVLAFTLL LIDSSSLRQR GRTFLAVVSF ACASVLVWIA
YDYSQQYSTW FSLTVGALLG VGALGVVIVL FTEAHELAEA VWTRKRRRPF LPITAAQAYR
PKVSIHVPCY NEPPELLKQT LDALARLDYP DYEVLVIDNN TRDPAVWQPV EAHCARLGER
FRFFHVAPLE GFKAGALNFA LGHVAADVEV VAVIDADYCV DPDWLRHMVP HFGDPRIAVV
QSPQDYRDQH ESAFKRLCYA EYKGFFHIGM VTRNDRDAII EHGTMTMIRR SVLDELRWPE
WCITEDAELG LRVFEKGLSA AYFERSYGKG VMPDTFIDFK KQRFRWAYGA IQIMKRHTDA
LLRGRGPDGS RLTRGQRYHF VAGWLPWIAD GLNIFFTLGA LLWSAAMIIV PKRVDPPLLI
FAILPLALFA FKVGKILFLY RRTVGVDLRD SFFAALAGLS LSHTIAKAVL YGFVTRGIPF
FRTPKMRSSH GLLVALAEAR EEVFVMLLLW GAAAGIVAVQ GVPSRDLLIW VAMLLVQSLP
YLAALVMALL SSLPKPREEL AGGAEQIGG
|
|---|
| |