Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_48880 |
Symbol | |
ID | 4380135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4345187 |
End bp | 4346203 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639326494 |
Product | putative bacteriophage integrase |
Protein accession | YP_792059 |
Protein GI | 116049139 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000942528 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000000101575 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGATCA CCAAGCTTGA GGATGGCCGC TGGCTGGCCG ACGTTGAGCC GATCAAGGGC AAGCGTTTTA GGAAGCGTTT CAAGACCAAG GGCGAAGCCC AGCGGTTCGA GGCGATGGTG CGGACGAAGC ATGCGCGACA GCGGGAGTGG AACCCCGTTC AGCAAGATAA GCGACTGCTG TCGGAACTTA TAGAGCGTTG GTATGAATTG CATGGGCACT CGATTACCAG CGGGAGGCGT CGTAAGAATT TGCTATTGCT GATCGCGTCT CGCCTGGGTG ACCCGGTGGG GCAGAGGTTC ACCACTGCTG ATCTGGTCGC GTTCAGGAAG CGTGAGTTGG AGGAGGGCGC CTTACCTAGG TCTATAAACG TTCGCTATTC GTATCTGAAA ACAGTATTCA CCGAGCTTCG TAGGCTCGGC GATATCGACT ATCCGAATCC TTTGGATCGT CTCAAGCCGT TGAAGCCTCA ACAGTCGGTT GTATCGTTCC TGTCTAAGGA TCAGGTAGCG GTGTTGGTGT CAGCGCTCCG GGACTATTCG ACCTTTCCCC ACTTGGCATT GATTTCAGAG GTCTGCTTGG CGACGGGGGC TCGCTGGTCG GAAGCGCAAG GGTTGACTCT GCCCATGGTC CGGGATGGAT CGGTGGTCTT CTCCAATACC AAATCAAAGC GTGTTCGATC CGTACCAATC TCGACAGACT TGCAGGCTCG ACTTGAGAAA TATTTCGCCG GTCGGAATCG CTTTCCCTCT TGTCGGGAGG CGTTTGCACG GATGGTGAAG CGTTGCGGTA TCGTATTGCC AAGAGGACAG TGCACCCATG TGCTACGCCA TACGTTCGCT TCCCACTTCA TGATGAACGG TGGAAACATC CTGGCGCTGA AAGAGATTCT TGGGCATTCG TCGCTGAACA TGACCATGCG CTATGCGCAT TTGTCGCCGG AGTACCTGCG GGACGCTATT CGACTCAACC CGCTGGCGGA TTTCGACAGT TCTTCGACAC TTGTCGAGAC GTCCTAG
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Protein sequence | MAITKLEDGR WLADVEPIKG KRFRKRFKTK GEAQRFEAMV RTKHARQREW NPVQQDKRLL SELIERWYEL HGHSITSGRR RKNLLLLIAS RLGDPVGQRF TTADLVAFRK RELEEGALPR SINVRYSYLK TVFTELRRLG DIDYPNPLDR LKPLKPQQSV VSFLSKDQVA VLVSALRDYS TFPHLALISE VCLATGARWS EAQGLTLPMV RDGSVVFSNT KSKRVRSVPI STDLQARLEK YFAGRNRFPS CREAFARMVK RCGIVLPRGQ CTHVLRHTFA SHFMMNGGNI LALKEILGHS SLNMTMRYAH LSPEYLRDAI RLNPLADFDS SSTLVETS
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