| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_48880 |
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| Symbol | |
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| ID | 4380135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4345187 |
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| End bp | 4346203 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639326494 |
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| Product | putative bacteriophage integrase |
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| Protein accession | YP_792059 |
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| Protein GI | 116049139 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000942528 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000000101575 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATCA CCAAGCTTGA GGATGGCCGC TGGCTGGCCG ACGTTGAGCC GATCAAGGGC
AAGCGTTTTA GGAAGCGTTT CAAGACCAAG GGCGAAGCCC AGCGGTTCGA GGCGATGGTG
CGGACGAAGC ATGCGCGACA GCGGGAGTGG AACCCCGTTC AGCAAGATAA GCGACTGCTG
TCGGAACTTA TAGAGCGTTG GTATGAATTG CATGGGCACT CGATTACCAG CGGGAGGCGT
CGTAAGAATT TGCTATTGCT GATCGCGTCT CGCCTGGGTG ACCCGGTGGG GCAGAGGTTC
ACCACTGCTG ATCTGGTCGC GTTCAGGAAG CGTGAGTTGG AGGAGGGCGC CTTACCTAGG
TCTATAAACG TTCGCTATTC GTATCTGAAA ACAGTATTCA CCGAGCTTCG TAGGCTCGGC
GATATCGACT ATCCGAATCC TTTGGATCGT CTCAAGCCGT TGAAGCCTCA ACAGTCGGTT
GTATCGTTCC TGTCTAAGGA TCAGGTAGCG GTGTTGGTGT CAGCGCTCCG GGACTATTCG
ACCTTTCCCC ACTTGGCATT GATTTCAGAG GTCTGCTTGG CGACGGGGGC TCGCTGGTCG
GAAGCGCAAG GGTTGACTCT GCCCATGGTC CGGGATGGAT CGGTGGTCTT CTCCAATACC
AAATCAAAGC GTGTTCGATC CGTACCAATC TCGACAGACT TGCAGGCTCG ACTTGAGAAA
TATTTCGCCG GTCGGAATCG CTTTCCCTCT TGTCGGGAGG CGTTTGCACG GATGGTGAAG
CGTTGCGGTA TCGTATTGCC AAGAGGACAG TGCACCCATG TGCTACGCCA TACGTTCGCT
TCCCACTTCA TGATGAACGG TGGAAACATC CTGGCGCTGA AAGAGATTCT TGGGCATTCG
TCGCTGAACA TGACCATGCG CTATGCGCAT TTGTCGCCGG AGTACCTGCG GGACGCTATT
CGACTCAACC CGCTGGCGGA TTTCGACAGT TCTTCGACAC TTGTCGAGAC GTCCTAG
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| Protein sequence | MAITKLEDGR WLADVEPIKG KRFRKRFKTK GEAQRFEAMV RTKHARQREW NPVQQDKRLL
SELIERWYEL HGHSITSGRR RKNLLLLIAS RLGDPVGQRF TTADLVAFRK RELEEGALPR
SINVRYSYLK TVFTELRRLG DIDYPNPLDR LKPLKPQQSV VSFLSKDQVA VLVSALRDYS
TFPHLALISE VCLATGARWS EAQGLTLPMV RDGSVVFSNT KSKRVRSVPI STDLQARLEK
YFAGRNRFPS CREAFARMVK RCGIVLPRGQ CTHVLRHTFA SHFMMNGGNI LALKEILGHS
SLNMTMRYAH LSPEYLRDAI RLNPLADFDS SSTLVETS
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