| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_48800 |
|---|
| Symbol | |
|---|
| ID | 4380142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4338173 |
|---|
| End bp | 4338790 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639326487 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792052 |
|---|
| Protein GI | 116049146 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.040428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0000000044472 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCCATGC TTAAACGCTT AGCACCCCTC GTGCCCATGA GTTTCGTTCT GCTGCTGGCC
GCTTGCGCCA GCCATTCGCC GGAGCCGCAG GTCGCCAAAG AGCCGACCGC AGCCAAGAGC
AGCATCGACG TCGAACGCGA CGCGATCGCT TGGCAGGATG TTGAGGACGA AGGGGCGGAC
AATTCATCGG CTGGTACGCC TGCGCTGGCG TCCAGCATCC TCGAGCGCGC TTTCGAACTG
ATCGGTACGC CGTACCGTTT CGGCGGTACG ACGGCGAAAG GCTTCGATTG CAGCGGCTTC
GTCGGCTACC TGTTCCGCGA GGAGGCCGGC ATCAAGCTGC CGCGCTCCAC CCGCGAACTC
ATCGATATGG ACGTGCCGCT GGTCTCCAAG GACGAGTTGC AGCCGGGCGA CCTGCTGTTC
TTCAACAACC GTGGCCGTGG CCGCGTCAGC CACGCCGGCA TCTACATCGG CGATGGCCAG
TTCATCCATT CCGCCAGCCG TCGCGGCGGC GGGGTGCGGG TGGACAGCCT GGACTCCAGC
TACTGGAGCC TGAGCTACAT GGAAGCCAAG CGGGTGCTCG AACCCGGCTA CAAGGACGCC
CTGACGAGCA AGCGCTAA
|
|---|
| Protein sequence | MPMLKRLAPL VPMSFVLLLA ACASHSPEPQ VAKEPTAAKS SIDVERDAIA WQDVEDEGAD
NSSAGTPALA SSILERAFEL IGTPYRFGGT TAKGFDCSGF VGYLFREEAG IKLPRSTREL
IDMDVPLVSK DELQPGDLLF FNNRGRGRVS HAGIYIGDGQ FIHSASRRGG GVRVDSLDSS
YWSLSYMEAK RVLEPGYKDA LTSKR
|
|---|
| |