Gene PA14_48660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48660 
Symbol 
ID4380153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4327830 
End bp4328765 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content69% 
IMG OID639326476 
Producthypothetical protein 
Protein accessionYP_792041 
Protein GI116049157 
COG category[P] Inorganic ion transport and metabolism
[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein
[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00123843 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGAAC TGCAACCCCT GCTGGAGAAC CACGGGCTGC TCCTGCTGTT CCTCAACGTG 
CTCTGCGAAC AGGCCGGGCT GCCGATCCCC GCCTACCCGG CGCTGATCGT CGCCGGCGCG
CTGGCCATGC AGGGCGTCGG CGCACCGCTG GGCATGGTCC TGCTGGTGGT GGTGCTCGCC
TGCCTGCTGG CGGACGTCGC CTGGTACCTG GCCGGGCGCC GCTATGGCGG CTTCCTCCTG
CGCAGCATCT GCAAGGTCTC GCTGTCCCAG GACAGTTGCA TCCGCCAGAG CCAGAACATG
TACCTGCGGG TCGGTCCGAG GGCGCTGCTG ATGTCGAAGT TCCTGCCCGG CGCCAGTGCG
TTGTCCACCA CCCTGGCCGG CATGACCCGC ACCCACCTGC GCCGCTTCCT CGCCTACGAC
GCCGCCGGCT CGGCACTCTG GGCCGGTTCC GCGCTGCTGC TGGGGGTGAT CTTCAGCGAT
GCGGTGGACC ACCTGCTGGC CCTGCTCAGC GACTACGCGG CCATCGGCGC GCTGCTGATC
GCCGGCGCCT TCGCCGCCTT CATCGCCTGG AAGCTCTGGC AGCGCCAGCG CCTGCTGTCG
CGCAGCCGGC GGATTCCGCG AATCAGCGTG GAGGAACTGG AAAGCCTTCG CGAACAGGGG
CAATTGCCGG TGATCCTCGA TGTTCGCGCC CACCACGAGG ACGAGCCGAG CGGCATTCCG
GGAGCCATCC CGGTGGAGCT GAACGTGTCG CTGAAGGACC TGCCCGGCGA CCTCAGGGAC
GCCAGCATCG TCATCTATTG CGCCTGTCCC CACGAACTTT CCGCCGCGAT GCTTGCCCAG
CGCCTCAACG CCTCCGGCTT CACCCGCACC TGGGCGCTGG CCGGCGGCCT GGACGCCTGG
CGCAAGGCCT ACGGGCAGGT CGCGGCGAAC GCCTGA
 
Protein sequence
MRELQPLLEN HGLLLLFLNV LCEQAGLPIP AYPALIVAGA LAMQGVGAPL GMVLLVVVLA 
CLLADVAWYL AGRRYGGFLL RSICKVSLSQ DSCIRQSQNM YLRVGPRALL MSKFLPGASA
LSTTLAGMTR THLRRFLAYD AAGSALWAGS ALLLGVIFSD AVDHLLALLS DYAAIGALLI
AGAFAAFIAW KLWQRQRLLS RSRRIPRISV EELESLREQG QLPVILDVRA HHEDEPSGIP
GAIPVELNVS LKDLPGDLRD ASIVIYCACP HELSAAMLAQ RLNASGFTRT WALAGGLDAW
RKAYGQVAAN A