Gene PA14_48590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48590 
Symbol 
ID4380160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4320187 
End bp4320933 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID639326469 
Producthypothetical protein 
Protein accessionYP_792034 
Protein GI116049164 
COG category[R] General function prediction only 
COG ID[COG4976] Predicted methyltransferase (contains TPR repeat) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00740974 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0133617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGT TCGACAAGCA CGCAGACGCC TACAACGTGG TCCGCGGCAA GATCGCCTAT 
CCGGATTCGC TCTACCGCAA CCTCGCCGAA CGCGCCCCGG CACGCGAAGC GGCGCTGGAC
ATCGGCTGCG GCAACGGCGT CTCGACCGTC CGCCTGCAAC CCTGGTTCCG CTACGTGGAA
GGCAGCGACC TGGGCGAGGC GCTGATCGCC AAGGCCCGCG AGAACTACCC GGAGATCCGC
TTCAGCGTGT CGCCGGCGGA AACCTTCGCG CCGCAACGCC GCTTCGACCT GGTCACCAGC
GCCACCTCCT TCTACTGGAT GGACCGCAAG CAGGTGCTGA CGCGCATGGC CGACTGGCTG
ACCCCCGGCG GGCTGTTCTG CGCCTACAAG TACGACTTCC CGATCGCCTA CGGGCCGCTG
CGCGACTTCA TCGAGCACGA ACTGGTGAAC AAGTGGGCCA AACACCGTGA TCCGCGCCTG
ACCCGCTATG ACGACACCCT GGAGATCATG GGCAGTTGCC CGCACCTGCG CGACTGCCGC
CGCGAAGTGT TCGCCAACAT CATCTTCCTC AGCCCGGAGG AGGTCGCGCT GTTCTTCCTC
TCCACCAGCT ACGTGACCCG CTACATCGAG CAGGAAGGCG GCGAAGACTA CGCCGACCGC
TTCATCGCCG CGGTGCGCGA GATCGAGAGC GCGCCGCAGG TGGCGGTGAA CTTCGACATC
CACGCCTTCA CCGCGCTGAA TCGCTGA
 
Protein sequence
MKQFDKHADA YNVVRGKIAY PDSLYRNLAE RAPAREAALD IGCGNGVSTV RLQPWFRYVE 
GSDLGEALIA KARENYPEIR FSVSPAETFA PQRRFDLVTS ATSFYWMDRK QVLTRMADWL
TPGGLFCAYK YDFPIAYGPL RDFIEHELVN KWAKHRDPRL TRYDDTLEIM GSCPHLRDCR
REVFANIIFL SPEEVALFFL STSYVTRYIE QEGGEDYADR FIAAVREIES APQVAVNFDI
HAFTALNR