Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_48590 |
Symbol | |
ID | 4380160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4320187 |
End bp | 4320933 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326469 |
Product | hypothetical protein |
Protein accession | YP_792034 |
Protein GI | 116049164 |
COG category | [R] General function prediction only |
COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00740974 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0133617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCAGT TCGACAAGCA CGCAGACGCC TACAACGTGG TCCGCGGCAA GATCGCCTAT CCGGATTCGC TCTACCGCAA CCTCGCCGAA CGCGCCCCGG CACGCGAAGC GGCGCTGGAC ATCGGCTGCG GCAACGGCGT CTCGACCGTC CGCCTGCAAC CCTGGTTCCG CTACGTGGAA GGCAGCGACC TGGGCGAGGC GCTGATCGCC AAGGCCCGCG AGAACTACCC GGAGATCCGC TTCAGCGTGT CGCCGGCGGA AACCTTCGCG CCGCAACGCC GCTTCGACCT GGTCACCAGC GCCACCTCCT TCTACTGGAT GGACCGCAAG CAGGTGCTGA CGCGCATGGC CGACTGGCTG ACCCCCGGCG GGCTGTTCTG CGCCTACAAG TACGACTTCC CGATCGCCTA CGGGCCGCTG CGCGACTTCA TCGAGCACGA ACTGGTGAAC AAGTGGGCCA AACACCGTGA TCCGCGCCTG ACCCGCTATG ACGACACCCT GGAGATCATG GGCAGTTGCC CGCACCTGCG CGACTGCCGC CGCGAAGTGT TCGCCAACAT CATCTTCCTC AGCCCGGAGG AGGTCGCGCT GTTCTTCCTC TCCACCAGCT ACGTGACCCG CTACATCGAG CAGGAAGGCG GCGAAGACTA CGCCGACCGC TTCATCGCCG CGGTGCGCGA GATCGAGAGC GCGCCGCAGG TGGCGGTGAA CTTCGACATC CACGCCTTCA CCGCGCTGAA TCGCTGA
|
Protein sequence | MKQFDKHADA YNVVRGKIAY PDSLYRNLAE RAPAREAALD IGCGNGVSTV RLQPWFRYVE GSDLGEALIA KARENYPEIR FSVSPAETFA PQRRFDLVTS ATSFYWMDRK QVLTRMADWL TPGGLFCAYK YDFPIAYGPL RDFIEHELVN KWAKHRDPRL TRYDDTLEIM GSCPHLRDCR REVFANIIFL SPEEVALFFL STSYVTRYIE QEGGEDYADR FIAAVREIES APQVAVNFDI HAFTALNR
|
| |