| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_47950 |
|---|
| Symbol | |
|---|
| ID | 4385550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4268733 |
|---|
| End bp | 4269377 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639326423 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_791988 |
|---|
| Protein GI | 116049209 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.274179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCACCA CCAGCCTCAC CGCCAACGAC CTGCTGTTCC TCCTGCAAGG CGCCTGGACC
ACCCTCGCCA TCACCGCCAT GGCGATGCTG ATCGGCACCC TGCTGGGTGT CGTCTTCGGC
CTGCTCCGCG CCCTGCTGCC ACGCGCCAGC CTGCCGCTGG CGGCGCTGCT CGACGTATTC
CGCAGCGTGC CGCTGCTGAT CCAGTTCGTC CTGCTCAATT CCTTCAAGAG CATCCTCGGC
CTCGACTGGA GCGCCTTCGC CGTGGCCTGC CTGGTGCTCG GCGTGTACGC CGCCGCCTAC
TGCACCGAGG TGGTCCGCGG CGGCGTCCTC TCGGTACCGC CGAGCGTGCG CCGGGCGGCG
CGTTCGCTGG GCCTGAGCTA TCGCCAGGAC CTGTTCCACA TCGTCCTGCC GATGGCCGCC
CGGGTGGCCT TCCCCGGTTG GGTCAACCTG ACCCTGTCGG TGATGAAGGA CACCTCGCTG
GTGCTCTGGA TCGGCATCGT CGAACTGCTG CGCGCCTCGC AGACCATCGT CACGCGCATC
CAGGAACCGC TCTTCGTGCT CTGCATCGCG GGGCTCGTCT ATTACCTCAT GAGCTGGGTG
GTCGCGCGAC TCGGCGCCCG GCTGGAACGG AGATGGCAGC AATGA
|
|---|
| Protein sequence | MFTTSLTAND LLFLLQGAWT TLAITAMAML IGTLLGVVFG LLRALLPRAS LPLAALLDVF
RSVPLLIQFV LLNSFKSILG LDWSAFAVAC LVLGVYAAAY CTEVVRGGVL SVPPSVRRAA
RSLGLSYRQD LFHIVLPMAA RVAFPGWVNL TLSVMKDTSL VLWIGIVELL RASQTIVTRI
QEPLFVLCIA GLVYYLMSWV VARLGARLER RWQQ
|
|---|
| |