Gene PA14_47370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_47370 
Symbol 
ID4381775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4219948 
End bp4220487 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content69% 
IMG OID639326377 
Productputative signal peptidase 
Protein accessionYP_791942 
Protein GI116049255 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.627585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTGC TCGCCGCGAT CATGCTGGCC GTCTACCTGG CGAATCCGTT CGGCACCGCC 
AGTCTCGACC CGCGCGCGCG GCTCCTCGGC GTGGCGCTGT ACAAGATCCC TTCGCGCTCG
ATGGAACCGA CCTTGCAACA GGGCGACTTC ATCCTCGCCA ACGCCGCGCG CTACGCCTTC
GCCGACCCGC AGGTCGGCGA CCTGGTGGTG TTCCGCTTCC CGCCGCAGCG CAGCATCGCC
TATGTGAAGC GCATCGCCGG GATACCCGGC GATCGCGTGC GAATCGATGG CGGCCGGCTC
TACGTCAATG ACCACCAGGT GACCGAGCCC TACCTGGCGC AGCAGGCGCT GCGCCAGCCG
GACTCCCTGC GCATGGCCGA GCGGACCGTC CCCGCCGGCC ACTACTTCAT GCTCGGCGAC
AACCGCGACA ACTCCAACGA CAGCCGCTAC TGGGGCTACG TACCGCGCGC CGACCTGGTC
GGCCGGGTGT TCGTCGTCTG GTATGCCGAG GACACCCGGC GCATCGGTTC GGTGCGCTGA
 
Protein sequence
MGLLAAIMLA VYLANPFGTA SLDPRARLLG VALYKIPSRS MEPTLQQGDF ILANAARYAF 
ADPQVGDLVV FRFPPQRSIA YVKRIAGIPG DRVRIDGGRL YVNDHQVTEP YLAQQALRQP
DSLRMAERTV PAGHYFMLGD NRDNSNDSRY WGYVPRADLV GRVFVVWYAE DTRRIGSVR