Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_46550 |
Symbol | |
ID | 4382291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4144573 |
End bp | 4145301 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639326306 |
Product | ribonuclease |
Protein accession | YP_791871 |
Protein GI | 116049326 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3719] Ribonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000177193 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00000141946 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCAGAG TTCCTCAATT CCTCCTCGGC TTCGTTATGG CGCATATGGT CTTCGTCGCG CACGCTGCTC CCAGTTGTAT CCTTCCTGAA AAGGCCGAAA GCGGCTACGA CTACAACACG AACCGGGACA GTTACGGGAA AAATGACTCC GCGACGACTG ACTACTACAA GCTCGCCATA AACTGGTCAG GAGCCCACTG TGCGGAAAAG GCGAAGGAGA TCGAAAACCT AAAGAAGAAG GGGAAGTTTG AAGCTGCTGA AACCGTCCGT AATAGGAACG CATTCCAATG CTTTTCCAAT AACAAGTTTG GGTGGATCCT CCATGGGCTT TGGGCACAGA CCTGCAATGG TAAAAACTGG GAAGACTGCC GGGACTGGAA GGCAATCCAG ACCCATCCAC GGCTATGCCG AGGCGACCTT CCTGCTGTCG ATTACGAGGA GATCAAAAGC CACCTATGCC AATCCCCGGG GGCGGCGCTC CTGCAGGGAG AGTGGGAAAA ACACGGAGCA TGTAACTTCG CATCGGCGTC GGAATACTTC TCGAGACAAG GCCAGCTTTT CGCAGACCTT TCCTTACCCG AAAGCCGGCT ACCAGACAAG GAGCTGCTCC AGTGGCTCAA GGAAAAGAAT CCCTCTCTTG CGGACAAGGA GATCCAGATC GACGGCAACG AGTTCTACGT CTGCTACGAC GTGAACTTCA CTCCAATGAG TTGCCCACCG CTGGAGTAA
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Protein sequence | MIRVPQFLLG FVMAHMVFVA HAAPSCILPE KAESGYDYNT NRDSYGKNDS ATTDYYKLAI NWSGAHCAEK AKEIENLKKK GKFEAAETVR NRNAFQCFSN NKFGWILHGL WAQTCNGKNW EDCRDWKAIQ THPRLCRGDL PAVDYEEIKS HLCQSPGAAL LQGEWEKHGA CNFASASEYF SRQGQLFADL SLPESRLPDK ELLQWLKEKN PSLADKEIQI DGNEFYVCYD VNFTPMSCPP LE
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