Gene PA14_46550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_46550 
Symbol 
ID4382291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4144573 
End bp4145301 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content53% 
IMG OID639326306 
Productribonuclease 
Protein accessionYP_791871 
Protein GI116049326 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3719] Ribonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000177193 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00000141946 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAGAG TTCCTCAATT CCTCCTCGGC TTCGTTATGG CGCATATGGT CTTCGTCGCG 
CACGCTGCTC CCAGTTGTAT CCTTCCTGAA AAGGCCGAAA GCGGCTACGA CTACAACACG
AACCGGGACA GTTACGGGAA AAATGACTCC GCGACGACTG ACTACTACAA GCTCGCCATA
AACTGGTCAG GAGCCCACTG TGCGGAAAAG GCGAAGGAGA TCGAAAACCT AAAGAAGAAG
GGGAAGTTTG AAGCTGCTGA AACCGTCCGT AATAGGAACG CATTCCAATG CTTTTCCAAT
AACAAGTTTG GGTGGATCCT CCATGGGCTT TGGGCACAGA CCTGCAATGG TAAAAACTGG
GAAGACTGCC GGGACTGGAA GGCAATCCAG ACCCATCCAC GGCTATGCCG AGGCGACCTT
CCTGCTGTCG ATTACGAGGA GATCAAAAGC CACCTATGCC AATCCCCGGG GGCGGCGCTC
CTGCAGGGAG AGTGGGAAAA ACACGGAGCA TGTAACTTCG CATCGGCGTC GGAATACTTC
TCGAGACAAG GCCAGCTTTT CGCAGACCTT TCCTTACCCG AAAGCCGGCT ACCAGACAAG
GAGCTGCTCC AGTGGCTCAA GGAAAAGAAT CCCTCTCTTG CGGACAAGGA GATCCAGATC
GACGGCAACG AGTTCTACGT CTGCTACGAC GTGAACTTCA CTCCAATGAG TTGCCCACCG
CTGGAGTAA
 
Protein sequence
MIRVPQFLLG FVMAHMVFVA HAAPSCILPE KAESGYDYNT NRDSYGKNDS ATTDYYKLAI 
NWSGAHCAEK AKEIENLKKK GKFEAAETVR NRNAFQCFSN NKFGWILHGL WAQTCNGKNW
EDCRDWKAIQ THPRLCRGDL PAVDYEEIKS HLCQSPGAAL LQGEWEKHGA CNFASASEYF
SRQGQLFADL SLPESRLPDK ELLQWLKEKN PSLADKEIQI DGNEFYVCYD VNFTPMSCPP
LE