| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_46540 |
|---|
| Symbol | |
|---|
| ID | 4382292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4142401 |
|---|
| End bp | 4144101 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639326305 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_791870 |
|---|
| Protein GI | 116049327 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000624793 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.00000317179 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCCA GCTACGAAAG CAAGAACACG TCAGATGGCC TTACTCTGAA ACTGTATCGC
GGCGAAGGAG CGGCTCTGCT CGCATTCGAT CTCGATGAAG AGAGGGCTAC CCGAGATTTC
GTTGGCTTCA CCATCGAGGT GCGATACCCA GGTTCCCTGA AGTGGGGGGC AATCCGAAAT
CGCCTGCATT TCGAATACCC ACCGACTGAG CATAGAGAGC GGACCTATAA GTCCACTGAA
GCACCGCTCC AGAAATTCCG CTGGATACAC GTTCCCACCG AAACTCCGGA GGGCAACTTC
GAATACCGCG TTACAGCACG GTACATGTCT GAAAACGAGA CGCTGCACAA CGGACCGCAA
GTGACGGGAA AAATCTCGCT GTCACCACAG ACGATTGAGG ACTTTGTGAA CGTAGGGTTT
ACTCGCGGCT TCGCTAGCTC ACAAGCCTAC GCAGATCGTT TCGAGAACGA CAAAGGGATC
CTCCCACCGC GTGGGACGCC AGCAGAAAAG TACCTCAACC ACGACATGAC CCCATTCCAG
AAGCACTATG AGTGGCTGGG TTTTGAAGCT CGCCGGTTGA TCCTGCAAAC GCTCGAGGAG
GTTGAGCATG ATCCGGGCCT CCGCCTGGAC GCGCTCGTGT ACGAATGCAA GGAGCCAGAC
ATCCTCCAGC GCTTGGAGCG TCTTGGTAAT CGCCTCCGGG TAATCATCGA CGACCATGAT
GAGCAGGGAG ATCCAGATTC TTGCGAGACC ATCAGCGCTA ACCGCCTAAA ACAGAAGGGC
GCACAAGTGA AGCGCATGCA CTTCCGTCGC CAACAGCACA ACAAGGTGCT CCTCGTGCGC
CGAGCAGACG GCTCGGCCGC GAAGGTGCTG GCCGGTTCGA CCAACTTCGC CATGCGCGGC
CTCTACATCC AGGCAAACAA CGCACTCTTG TTCGAGGATG CAACGGTATC CGAAAAATTC
AGCGAGCTGT TTGATGCGTA CTGGAACACC TCTAAAGATT TCAGAGAAAA CCAGCTATCG
AAGCAATGGT GGGTCGTTCG TGATGAACCC GAATCGCGAG TGTCCCTATG CTTCTCTCCA
CACACGGATA GTGGCCTGTC ACTAGACCCG GTCGCTGATG CAATTGCGCA AGCCGACAGC
TCAGTTCTGT ATTCGGTGGT ATTCCTGAAC ATCCTCAAAG GCACAGTGCG CAATGAGCTT
GAGGCGCTTA TGCAGCGCTC CTTGTTCTCC TATGGTGTTG CGCAGCGAAC AGGTGGTCTC
TCCGTCACGA AGCCTGATGG AAGTGTCGGC CTGCTTCCCT TTGCATACCT CGGAGAAACC
GCTCCAGAGC CTTTCAAATC GGAGTGGAAC GGCGACACAA CTGAATTTTC CAATATGGTC
CATCACAAGT TCGTCGTGAC GGACTTCAAT GGAAAGCGCC CTGTCGTTTT CACCGGCTCG
TCGAATCTGG CAGCCGGCGG CGAGAAGGAG AATGGTGATC ACCTGATATG CATCGAGGAC
CGCCGGATTG CTATCGTCTA CGCAATCGAA GCACTGCGCC TCTTCGACCA TTTCCATTTC
AGGGTAAAGA CCAAGCCTGG CGAGAATGCC CCCCCAATAC ACTTGGCAAA ACCACCAACT
GAGGGAGAGG ATCCATGGTT CGCCTCTTAC TACAGAAAGG GGCACCACAA GGAACGGGAT
CGCAAGCTGT TCAGTCAGTA G
|
|---|
| Protein sequence | MVSSYESKNT SDGLTLKLYR GEGAALLAFD LDEERATRDF VGFTIEVRYP GSLKWGAIRN
RLHFEYPPTE HRERTYKSTE APLQKFRWIH VPTETPEGNF EYRVTARYMS ENETLHNGPQ
VTGKISLSPQ TIEDFVNVGF TRGFASSQAY ADRFENDKGI LPPRGTPAEK YLNHDMTPFQ
KHYEWLGFEA RRLILQTLEE VEHDPGLRLD ALVYECKEPD ILQRLERLGN RLRVIIDDHD
EQGDPDSCET ISANRLKQKG AQVKRMHFRR QQHNKVLLVR RADGSAAKVL AGSTNFAMRG
LYIQANNALL FEDATVSEKF SELFDAYWNT SKDFRENQLS KQWWVVRDEP ESRVSLCFSP
HTDSGLSLDP VADAIAQADS SVLYSVVFLN ILKGTVRNEL EALMQRSLFS YGVAQRTGGL
SVTKPDGSVG LLPFAYLGET APEPFKSEWN GDTTEFSNMV HHKFVVTDFN GKRPVVFTGS
SNLAAGGEKE NGDHLICIED RRIAIVYAIE ALRLFDHFHF RVKTKPGENA PPIHLAKPPT
EGEDPWFASY YRKGHHKERD RKLFSQ
|
|---|
| |