Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_44690 |
Symbol | |
ID | 4382900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3983296 |
End bp | 3983955 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639326162 |
Product | GntR family transcriptional regulator |
Protein accession | YP_791727 |
Protein GI | 116049470 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0330789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCA AGGCCCCGGA CAGCCTGGCA GAGCAGATCG CCCACCACCT CGCGGAACGC ATCATCCGGG GAGAACTCAA GGAACGGGAA CGTATCCAGG AGCAGAAGGT CACCCAGACC CTCAACGTCA GTCGCGGCTC GGTCCGCGAG GCGCTGCTGA TTCTCGAACG CCGCCACCTG GTGAACATCC TGCCGCGCCG CGGCGCCCAG GTGTCCGAAC TGTCCCCGCA ACATGTGGAA AGCCTCTACG CGCTGATCGT GCAGCTCTAC ATCCTGCTGG CGGAAAGCGT CGCCCGGCGC TGGCGCAGCG AAGCCGAGCT GGCACCGTTC CTGGCCATCC AGCAGCGCCT GCTGAACAAC CTGGCGCAAA GCGATATCGA CGGCTTCGTC GAGGCCAGTT TCGACATCAT GCGCGCGGCC TTTCCTTTCG CGAACAATCC CTACCTGCAG GAGACCGTCG AAAACCTGCT GCCGGCGGTG AGTCGCGCCT ACCACCTGGC GCTGGAGCGG CGCAAGGCGG AAATGAACCA GTTCCTCGGC AGTTTCGCCC AGCTCCTGCA AGCGGTGATC GCCCGTGACG AGGCGAGGAT CCGCGAGGTC CTGCTGGAAT ACGGCCGCCA CAACTGCCAG CTGGTGCTGG CCGCGCTCGC CGAACGCTGA
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Protein sequence | MTFKAPDSLA EQIAHHLAER IIRGELKERE RIQEQKVTQT LNVSRGSVRE ALLILERRHL VNILPRRGAQ VSELSPQHVE SLYALIVQLY ILLAESVARR WRSEAELAPF LAIQQRLLNN LAQSDIDGFV EASFDIMRAA FPFANNPYLQ ETVENLLPAV SRAYHLALER RKAEMNQFLG SFAQLLQAVI ARDEARIREV LLEYGRHNCQ LVLAALAER
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