Gene PA14_43040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_43040 
Symbol 
ID4382919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3829090 
End bp3829596 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content65% 
IMG OID639326024 
Producthypothetical protein 
Protein accessionYP_791589 
Protein GI116049606 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.138878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG AAGGCTCGGT AGCCCCAAAG GAACGCATCA ACGTCACTTT CAAGCCCGCC 
ACCGGCGGCG CCCAGGAAGA AATCGAACTG CCGTTGAAGC TACTGGCGAT CGGCGATTAC
ACCCAGCGCG GGGATGAGCG CAAGGTGGAG GACCGCAAGC CGATCGGCAT CGACAAGATG
ACCTTCGACG AGGTCCTGGC CAAGCAGGAG CTGGGGCTGA CGCTGAGCGT ACCCAATCGT
CTCCAGGAGG AGGGCGGCAG CGACGAGCTG GCGGTGGGGC TGCAGATCAA CTCGATGAAG
GACTTCAACC CGGCCAGCAT CGTCGAGCAG GTGCCCGAGC TGAAGAAGCT GATGGAGTTG
CGCGATGCGC TGGTGGCCCT CAAGGGCCCG CTGGGCAACG CCCCGGCGTT CCGCAAGGCC
ATCGAAAGCG TACTCGCCGA CGACGAGTCC CGTAGCCGTG TGCTGGGCGA GCTGGGGCTG
AGCGCCGCCC CCTCCCAGGA CGCCTGA
 
Protein sequence
MAKEGSVAPK ERINVTFKPA TGGAQEEIEL PLKLLAIGDY TQRGDERKVE DRKPIGIDKM 
TFDEVLAKQE LGLTLSVPNR LQEEGGSDEL AVGLQINSMK DFNPASIVEQ VPELKKLMEL
RDALVALKGP LGNAPAFRKA IESVLADDES RSRVLGELGL SAAPSQDA