Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_42820 |
Symbol | |
ID | 4381405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3806993 |
End bp | 3807589 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639326004 |
Product | isochorismatase family hydrolase |
Protein accession | YP_791569 |
Protein GI | 116049626 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCATC CGCTCACCCT TTTGCAGATC AGCGGACGCG GCTACCCGCC AGCCCCCCTT CGGCAGAGCA CCTTGCTGAT CATCGATGCC CAGGAAGAGT ACCGCAGCGG CGCCCTGAGC CTGCCAGGCC TGGACGCTGC CGCCGCGGAA ATCGGCGTGC TGGTGCAGGC GGCCCGCGCC AACGGTACGC CCATCGTGCA TGTGCGCCAC CTGGGTATCC AGGGTGGCCT GTTCGATCCG CAGGGTCCGC GCGGCCAGTT CCTCCCGGAA CTGCAACCGG AAGCCGGGGA AAAGGTCGTG GAGAAACGCC TGCCCAATGC CTTCTCCGGC ACCGAGCTGC ACGACCTGCT GCAGAACCAC GGCCGTCTCG ACCTGATCGT CTGCGGTTTC ATGACCCATT CCAGCGTCAG CACCACCGTG CGCGCGGCCA AGGACTACGG CTACCGCTGC ACCCTCGCCG ACAGCGCCTG CGCCACCCGC GACATACCCA CCCTGAACGG CGGGGTCCTG AGCGCCGCGG ACCTGCAACG CGCCGAGATC GCCGCCCTCG GCGACAACTT CGCGGCGATC GTCGCCCAGG CCCGGGAACT GCTCTGA
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Protein sequence | MPHPLTLLQI SGRGYPPAPL RQSTLLIIDA QEEYRSGALS LPGLDAAAAE IGVLVQAARA NGTPIVHVRH LGIQGGLFDP QGPRGQFLPE LQPEAGEKVV EKRLPNAFSG TELHDLLQNH GRLDLIVCGF MTHSSVSTTV RAAKDYGYRC TLADSACATR DIPTLNGGVL SAADLQRAEI AALGDNFAAI VAQARELL
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