Gene PA14_42820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_42820 
Symbol 
ID4381405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3806993 
End bp3807589 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content68% 
IMG OID639326004 
Productisochorismatase family hydrolase 
Protein accessionYP_791569 
Protein GI116049626 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCATC CGCTCACCCT TTTGCAGATC AGCGGACGCG GCTACCCGCC AGCCCCCCTT 
CGGCAGAGCA CCTTGCTGAT CATCGATGCC CAGGAAGAGT ACCGCAGCGG CGCCCTGAGC
CTGCCAGGCC TGGACGCTGC CGCCGCGGAA ATCGGCGTGC TGGTGCAGGC GGCCCGCGCC
AACGGTACGC CCATCGTGCA TGTGCGCCAC CTGGGTATCC AGGGTGGCCT GTTCGATCCG
CAGGGTCCGC GCGGCCAGTT CCTCCCGGAA CTGCAACCGG AAGCCGGGGA AAAGGTCGTG
GAGAAACGCC TGCCCAATGC CTTCTCCGGC ACCGAGCTGC ACGACCTGCT GCAGAACCAC
GGCCGTCTCG ACCTGATCGT CTGCGGTTTC ATGACCCATT CCAGCGTCAG CACCACCGTG
CGCGCGGCCA AGGACTACGG CTACCGCTGC ACCCTCGCCG ACAGCGCCTG CGCCACCCGC
GACATACCCA CCCTGAACGG CGGGGTCCTG AGCGCCGCGG ACCTGCAACG CGCCGAGATC
GCCGCCCTCG GCGACAACTT CGCGGCGATC GTCGCCCAGG CCCGGGAACT GCTCTGA
 
Protein sequence
MPHPLTLLQI SGRGYPPAPL RQSTLLIIDA QEEYRSGALS LPGLDAAAAE IGVLVQAARA 
NGTPIVHVRH LGIQGGLFDP QGPRGQFLPE LQPEAGEKVV EKRLPNAFSG TELHDLLQNH
GRLDLIVCGF MTHSSVSTTV RAAKDYGYRC TLADSACATR DIPTLNGGVL SAADLQRAEI
AALGDNFAAI VAQARELL