| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_42620 |
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| Symbol | pscR |
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| ID | 4381422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3791591 |
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| End bp | 3792244 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639325987 |
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| Product | type III secretion system protein |
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| Protein accession | YP_791552 |
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| Protein GI | 116049643 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.13592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCAGT TGCCCGACGA GCTCGGCCTG ATCCTCGGCC TGGCCCTGCT CGCGCTGGTC
CCGTTCATCG CGGTGATGGC GACCTCCTTC ATCAAGATGA CCGTGGTCTT CTCGCTGCTG
CGCAACGCCC TGGGCGTCCA GCAGATTCCG CCGAACATGG CGATGTACGG GCTGGCGATC
ATCCTCAGCC TGTACGTGAT GGCACCGGTC GGCTTCGCCA CCCGCGATTA CCTGCGCAAC
CACGACGTCA GCCTGAGCGA CTCGGCATCG GTGGAACGCT TTCTCGACGA GGGCATGGCG
CCCTACCGGA ACTTCCTCAA GCGGCAGATC CAGGAGCGCG AACACACCTT CTTCATGGAA
AGCACCCGCC AGGTCTGGCC CAGCGAATAC GCCGAGCGGC TCGACCCGGA CAGCCTGCTG
ATCCTGCTGC CGGCCTTCAC CGTCAGCGAA CTGACCCGTG CGTTCGAGAT CGGCTTCCTG
ATCTACCTGC CCTTCATCGC CATCGACCTG ATCATCTCCA ACATCCTCCT GGCGATGGGC
ATGATGATGG TGTCGCCGAT GACCATTTCC CTGCCGTTCA AGCTGCTCCT GTTCGTCCTC
CTCGACGGCT GGGCGCGGCT GACCCACGGC CTGGTCATCA GCTACGGAGG CTGA
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| Protein sequence | MIQLPDELGL ILGLALLALV PFIAVMATSF IKMTVVFSLL RNALGVQQIP PNMAMYGLAI
ILSLYVMAPV GFATRDYLRN HDVSLSDSAS VERFLDEGMA PYRNFLKRQI QEREHTFFME
STRQVWPSEY AERLDPDSLL ILLPAFTVSE LTRAFEIGFL IYLPFIAIDL IISNILLAMG
MMMVSPMTIS LPFKLLLFVL LDGWARLTHG LVISYGG
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