Gene PA14_40940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_40940 
Symbol 
ID4381046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3650390 
End bp3651169 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID639325850 
Producthypothetical protein 
Protein accessionYP_791419 
Protein GI116049774 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTCG AACTCGCGAT AGACCCCAGC ACCCTGATCA TCCTGGCCGT GGTGGCCTTT 
CTCGCCGGCT TCATCGACGC CATCGCCGGC GGCGGCGGCC TGTTGACCAT CCCTGCGCTG
CTCACCGCCG GGGTCCCGCC GCACCTGGCG CTGGGTACCA ACAAGCTGAG CTCGACCTTC
GGTGCGGCGA CCGCCAGCTA CACCTTCTAC CGGCGCAAGC TGTTCCATCC CGGGAAGTGG
CGCAACGCTC TGCTCGCCAC CGCGATCGGC GCCGCCATAG GCGCCTGGGC GGCTCACCTG
CTGCCCGCCG AGTGGCTGAA CCGGATGCTC CCGGTGGTGG TATTCACCTG CGGCCTCTAC
ATGCTCTTCG GCGGCACGCC GAAGGCGCCG CTGGACGCCG ATACGCCGGT CGGACGCAAG
CGCCAGTGGC CGCAGGGCCT CGCCCTGGGC TTCTACGACG GCGTGGCGGG ACCGGGCACC
GGAGCGTTCT GGACCGTCAG CTCGCTGCTC ATGTACCCGC TGGACCTGGT CCGCGCCAGC
GGTGTGGCGC GGAGCATGAA CTTCGTCAGC AACATAGTGG CGCTGGCGGT GTTCGTCGCC
TCCGGCCAGG TGATCTGGTT GCTCGGCCTG TGCATGGGTG CGTCGCTGAT GGTCGGCGCC
TATTTCGGCG CGCGCACCGC CATCGGCGGT GGGGCGAAGT TCATTCGCCC GGTGTTCATC
CTGGTGGTCC TGGCGCTGAC CGCGCGGCTA GCCTGGCAGC ACTGGTTCAG CGGCGCCTGA
 
Protein sequence
MPFELAIDPS TLIILAVVAF LAGFIDAIAG GGGLLTIPAL LTAGVPPHLA LGTNKLSSTF 
GAATASYTFY RRKLFHPGKW RNALLATAIG AAIGAWAAHL LPAEWLNRML PVVVFTCGLY
MLFGGTPKAP LDADTPVGRK RQWPQGLALG FYDGVAGPGT GAFWTVSSLL MYPLDLVRAS
GVARSMNFVS NIVALAVFVA SGQVIWLLGL CMGASLMVGA YFGARTAIGG GAKFIRPVFI
LVVLALTARL AWQHWFSGA