Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_40350 |
Symbol | |
ID | 4385897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3605156 |
End bp | 3607432 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325805 |
Product | hypothetical protein |
Protein accession | YP_791374 |
Protein GI | 116049819 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.650358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGC AGGGCGGCGA GGCGCTGTAC CAGGTGGCGG TGCGCGCGCT TTGCGAGTTC AGCGCCAAGC GCGGCGACCT CGACCTGCGC TTCACCCCGT CGCCCAGCGC CCTGGAAGGC ATCGCCGGAC ATACCCTGGT GACCTCCCGG CGCCCCGCTC ACTACCAGCG CGAGGTGGCG CTGGACGGAC GCTACCGTCA CTTGCAGGTG CGCGGCCGGG CGGATGGCTA CGACCCGCAG GCGAACTGCC TGGAGGAAAT CAAGACCCAC CGCGGCGACC TCGCCCTGCA ACCGGCCAAC CACCGGCACC TGCACTGGGC CCAGGCCAGG GTCTACGGCT GGCTGCTCTG CGCCGAACGG AAGCTGGAGG AAGTCGAACT GGCGCTGGTC TACCTGGAGG TCGGCAGCCA GAAGGAGACC CGCTTCGTCG AGCGGGTGCG GGCCGACGAG CTGCGGCTGT TCTTCGAGAG CCAGTGCCAG GCGTTTCTCG CCTGGGCCGA GCAGGAACTG GCGCACCGCC AGCGGCGCGA CCGCGAACTG GCCGCGTTAC GCTTTCCCCA CGCCGAATTC CGCCACGGCC AGCGGCAACT GGCGGAGGCG GTGTACAAGG CCGCCTCCGC CGGTTGTTGC CTGATGGCCC AGGCGCCGAC CGGGATCGGC AAGACTATCG GCACGCTGTT CCCGCAACTC AAGGCGATGC CCGGGCAGCG CCTGGACCGG CTGTTCTTCC TGGCCGCCAA GACCCCGGGC CGGGCCCTCG CGCTGCATGC CCTGCGCAGC CTGGAAGGGG AGACCGGCGG ACTGCCGGTG CGGGTGCTGG AACTGGTGGC GCGGGACAAG GCCTGCGAGC ACCCGGACAA GGCCTGCCAC GGCGAATCCT GTCCCCTGGC CCAGGGCTTC TACGAACGCC TGCCGGCGGC CCGCGCCGCC GCCGTGGAGG CGCGCTGGCT GGACCAGGCG CGGTTGCGCG AGGTGGCGCT GGCGCACCGG GTCTGTCCCT ACTACCTGGG CCAGGAACTG GCGCGCTGGT GCGACCTGGC GGTGGGCGAC TACAACTACT ACTTCGACCT CGGCGCCATG CTCCATGGCC TGGCCCAGGT CAACCAGTGG CGGGTGGCGG TACTGGTGGA CGAGGCGCAC AACCTGGTGG AGCGCGGCCG GCGGATGTAT TCCGCCGAAC TCGACCAGGG CGATTTCCTC GGTGTGCGCA AGACCGCCCC GGAGGCCCTG AGGAAACCGC TGGAGCGCAT CCAGCGTGCC TGGAACGAAC TGGGCAAGAC CCAGGCGGAC GACTACCAGG CCTACGACGA GCCTCCGCAG AAGCTGCTCC TGGCCTTGCA GAACGCGGTG GCGGCGATCA ACGACCTGCT CGCCGAGCAA CCGCAGGCGC TGGAGCCGGC GTTGCAGGAG TTCTACTTCG CGATCCTGCA GTTCGGCCGT CTCGCCGAGC TGTTCGGCGA GCATTCGCTG TTCGACATCG AGAAGCGCCC AGGCCGCAAC GGCCGCAGCC TGGCCCGGCT GTGCCTGCGC AACGTGGTGC CGGCGGCGTT TCTCGCCGAG CGCTTCGCCG CCAGCCGCTC CACCGTGCTG TTCTCCGCTA CCCTCGGGCC GCGCGACTAT TACGCCGACC TGCTTGGCCT GCCGGCGGGC ACGCCCTGGC TGGAAGTGGA CTCGCCATTC AGCGCCGAGC AACTGGAGGT GCACATACAG CGTCGGGTTT CCACGCGCTA TGCGCAGCGT CAGGCCTCCC TGGCGCCCAT CGCGGCGATT CTCGGCGAGC AGTTTCGCCA GCGGCCGGGC AACTACCTGG CCTTCTTCAG CAGCTTCGAT TACTTGCAGC AGACGCTGGA CGTCTTCCGC CAGGCATACC CGTGGGTGCC GTGCTGGAGC CAGACGCGAC GGATGGACGA GGCGGAGCGC CGGGCCTTCC TCGAACGCTT CGTCGCGGGC GGCGAGGGCA TCGGCTTCGC CGTGCTCGGC GGTGCCTTCG GCGAAGGCAT CGACCTGCCT GGAGAGCGCC TGATCGGCGC CTTCATCGCC ACCCTCGGGT TGCCCCAGGT GAATCCGGTG AACGAGCAGA TCCGCCTGCG CATGCAGCGC CTGTTCGGTG ACGGCTACGA CTACACCTAC CTGTATCCGG GACTGCAGAA GGTGGTCCAG GCCGCCGGGA GGGTGATCCG CAGCCGCAGC GATCGCGGCG TGGTGCACCT GATCGACGAC CGTTTCGCCC AGGCCAGGGT GCGCCGGTTG CTACCGGGCT GGTGGCAACT GCGTTGA
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Protein sequence | MTEQGGEALY QVAVRALCEF SAKRGDLDLR FTPSPSALEG IAGHTLVTSR RPAHYQREVA LDGRYRHLQV RGRADGYDPQ ANCLEEIKTH RGDLALQPAN HRHLHWAQAR VYGWLLCAER KLEEVELALV YLEVGSQKET RFVERVRADE LRLFFESQCQ AFLAWAEQEL AHRQRRDREL AALRFPHAEF RHGQRQLAEA VYKAASAGCC LMAQAPTGIG KTIGTLFPQL KAMPGQRLDR LFFLAAKTPG RALALHALRS LEGETGGLPV RVLELVARDK ACEHPDKACH GESCPLAQGF YERLPAARAA AVEARWLDQA RLREVALAHR VCPYYLGQEL ARWCDLAVGD YNYYFDLGAM LHGLAQVNQW RVAVLVDEAH NLVERGRRMY SAELDQGDFL GVRKTAPEAL RKPLERIQRA WNELGKTQAD DYQAYDEPPQ KLLLALQNAV AAINDLLAEQ PQALEPALQE FYFAILQFGR LAELFGEHSL FDIEKRPGRN GRSLARLCLR NVVPAAFLAE RFAASRSTVL FSATLGPRDY YADLLGLPAG TPWLEVDSPF SAEQLEVHIQ RRVSTRYAQR QASLAPIAAI LGEQFRQRPG NYLAFFSSFD YLQQTLDVFR QAYPWVPCWS QTRRMDEAER RAFLERFVAG GEGIGFAVLG GAFGEGIDLP GERLIGAFIA TLGLPQVNPV NEQIRLRMQR LFGDGYDYTY LYPGLQKVVQ AAGRVIRSRS DRGVVHLIDD RFAQARVRRL LPGWWQLR
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