Gene PA14_39870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_39870 
Symbol 
ID4385624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3554748 
End bp3555284 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID639325764 
Productputative hydrolase 
Protein accessionYP_791333 
Protein GI116049858 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCC CGCCCGAGCT GATCATCCAC CAGACCCGCC ACTGGACGCT GAACCAGCGG 
ATCGACTCGG CCCTGCCCGG CTACTGCATG CTCGGCTCGC GGCAACCGGC GACGGCCTTC
CACCAACTGC CGGAACAAGC CCTCGCCGAA TTCGGGCCGC TGCTGGCCAG GGTCGAGCGC
GAAATGGACG CGCTGCTGCG GCCGCGACGC ATCTATGTCG GTCGCTACGG TCACATGCCC
GGCCTGCCGG TGCATTTCCA CCTGATTCCA CTGTACGACT GGGTCGAGGA ACTGTTCTGG
GAGGACACGC GCTACCGGAC GCTCCAGCAG TTCGGCGTGC CGACCACCGA ACCCCTTACC
GATGGCGCCG AGCTGACCCT GTTCGTCTGG CGCGAATTCT GCGAACGCGC CGATCCACCG
GCCGTGCGCG GCATGGATCG GCAACAGGCG ATCGCCGGAT TGCGCCGGGC CTTCGGCCAC
GGCGTCCAAC CCCGAACATC GCCTGGGCCG GACTCCGAGC CCGCGCAGGG CGCATGA
 
Protein sequence
MHIPPELIIH QTRHWTLNQR IDSALPGYCM LGSRQPATAF HQLPEQALAE FGPLLARVER 
EMDALLRPRR IYVGRYGHMP GLPVHFHLIP LYDWVEELFW EDTRYRTLQQ FGVPTTEPLT
DGAELTLFVW REFCERADPP AVRGMDRQQA IAGLRRAFGH GVQPRTSPGP DSEPAQGA