Gene PA14_38340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_38340 
Symbol 
ID4380308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3417655 
End bp3418077 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content68% 
IMG OID639325646 
Productputative ring-cleaving dioxygenase 
Protein accessionYP_791215 
Protein GI116049974 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0134299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCA CCCTCACCCA CCTGGCGCTG CACGTCCCCG ACCTCGACGC CTGCATCGCC 
TTCTACGAAA CCTTCTGCGG CATGCGGGTG ATCCACCGGC GCCCCGGCAA AGGCTCGCAG
ATCGTCTGGA TGGCCGAACC CGGCCAGGAA CAACGCTTCA TCTTCGTCAT CATGCCCGGC
GGCCAGCCGC GCAACCTGGC CAGCGACGAT TACAGTCATT TCGGCTTCGC CCTCTCCAGC
CGCGCCGCGG TAGACGATCT GGCGCGCCGC GCCGAGGCCG CCGGCTGCCT GGTCTGGGCG
CCGCGCGACG AGCCCTATCC GGTCGGCTAC TACTGCGGCC TGCGCGATCC CGCGGGCAAC
TATGTGGAGT TCAGTTACGG CCAGCCGCTG GGGCCGGGTT CCGAGGCACT ACCGATTCTC
TGA
 
Protein sequence
MSPTLTHLAL HVPDLDACIA FYETFCGMRV IHRRPGKGSQ IVWMAEPGQE QRFIFVIMPG 
GQPRNLASDD YSHFGFALSS RAAVDDLARR AEAAGCLVWA PRDEPYPVGY YCGLRDPAGN
YVEFSYGQPL GPGSEALPIL