Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_37000 |
Symbol | cupA5 |
ID | 4385575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3294854 |
End bp | 3295567 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639325545 |
Product | chaperone CupA5 |
Protein accession | YP_791114 |
Protein GI | 116050072 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.883088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCAGTA GGCGCGCGCT CGCGCTGCTG GCCATGCTTT GCCTCGCGCC GACGAGCGAG GCCGGAGTGA CCGCGGAGCG CACCCGCCTG GTGTTCGTGG AGGGCCAGCG CGAGGCCTCG TTGCTGCTGG TCAACCAGAA TCCCTACCCG GTGCTGGTGC AGGCGTGGGT CGATGACGGC GCCCTCGACG GCGAACCGGA TACCGCGCTG GCTCCGTTCC TGCCGCTGCC GCCCGTATTC CGCCTGGAGC CGGGACGCCA GCGCAGCCTG CGCCTGCTGG CTACCGGCCA GGCCCAGGCA CGGGATCGCG AATCGCTGTA CTGGCTGAAC ATCTACGAGA TCCCCCCGCA AGCCACCGCC GAGGCCGCTG GCCGGCCCCG ACTCACGGTC ACCCTGCGAA CCCAGATGAA GGTGCTGTAC CGCCCGCACG GCCTGCATCC GCACGCTGAG GACGCGGCCG CCGAACTGGG CTTCGCGCTG CGCGACGAGA CCCTGCGGGT GGACAACCCG ACGCCGTACT TCGTGTCCCT GGCGGGGCTG GCGCTGGAGA TAGGGGAGAC GCGCCTGGAT CTGCCCGGAA CGCTGCTGGC TCCGCGCTCG CAACGACGCC TCGGCCTGCC GCGGCGGGTG GACGGCGGGA CGCGCGGCGA GGTGGCGTTC GACTGGATCG ACGACAACGG CGTCAGCCGC CAGGAAAGGA AAGCTCTACA GTGA
|
Protein sequence | MSSRRALALL AMLCLAPTSE AGVTAERTRL VFVEGQREAS LLLVNQNPYP VLVQAWVDDG ALDGEPDTAL APFLPLPPVF RLEPGRQRSL RLLATGQAQA RDRESLYWLN IYEIPPQATA EAAGRPRLTV TLRTQMKVLY RPHGLHPHAE DAAAELGFAL RDETLRVDNP TPYFVSLAGL ALEIGETRLD LPGTLLAPRS QRRLGLPRRV DGGTRGEVAF DWIDDNGVSR QERKALQ
|
| |