Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_36840 |
Symbol | glgP |
ID | 4385775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3282592 |
End bp | 3285030 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639325531 |
Product | glycogen phosphorylase |
Protein accession | YP_791100 |
Protein GI | 116050086 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0058] Glucan phosphorylase |
TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGACA GCCAAGACCA GACCCCGAGC ACGGTCCAGA CCCTGAAAGC CAGCATCCTC GCCAAGCTGC GCTACAGCGT CGGCCGCGAC CCATCCACCG CCTGCCCGCA CGACTGGTTC GAAGCGGTGG CCCTGGCGGT GCGCGACCAC ATCATCGACC ACTGGGAGGA GGCCACCCCG CAAGGCGAAG CGCCCGCGCG CAAGCGGGTC TACTACCTGT CCCTGGAGTT CCTCATCGGT CGCCTGTTGC TGGACAACCT CGGCAACCTC GGGCTGCTCG AGGAAACCCG CCAGGCCCTT GCCGAGCTGG GCGTCGACCT GCAGCGGATC GTTGCCCTGG AGCCGGACGC GGCGCTCGGC AACGGCGGCC TCGGACGCCT GGCGGCATGC TTCATGGAAA GCATGGCCAG CCTCGACATT CCCGCGCATG GCTATGGCAT CCGCTACGAG CATGGCCTGT TCCGCCAGGT GCTGACCGAC GGCTGGCAGC AGGAGCAGAC CGAGACCTGG CTGGATTTCG GCAATCCCTG GGAGTTCGAA CGACCCGAGG TCAGCTACTA CATCGACTTC GGCGGCAGCG TGCAGGTCGA CAGCGAGCAC AGTGGCCGTG CCATCTGGCG GCCGGACGAG CGGATCCGGG CGATCGCCTA CGACACGCCG ATCGTCGGCT GGCGGCGTGC CAGCGTCAAC ACCCTGCGCC TGTGGCGCGC CCGCGCCGAG GAAGACCTGC AACTGGACCG TTTCAACGCC GGCGACCATA TCGGCGCGGT GGTCGACGTG GTCAAGGCGG AGAGCATCTC GCGGGTGCTG TATCCGGCCG ACAGCACCGA GGCCGGTCAG GAACTGCGCC TGCGCCAGGA GTACTTCTTC GTCTCAGCCT CGCTGCAGGA CCTGCTCGAC CGCCACCTGC GCCATCATCA CGACCTGCGT AGCCTGCCGG AACAGGTGGC GATCCAGCTC AACGACACCC ACCCGGCGAT CGCCGTCGCC GAGTTGATGC GGCAACTGGT GGACGTGCAC CAACTGGCCT GGCCGGACGC CTGGGCGCTG AGCGTGGCGA CCCTGTCCTA CACCAACCAC ACGCTGCTCC CGGAAGCCCT GGAATCCTGG CCGGTGGCGC TGATGGAGCG CCTGCTGCCG CGCCACATGC AGATCATCTA CCTGATCAAC GCCTTCCATA TAGACGCGCT GCGCGCCCAG GACATCCACG ACTTCGACCT GTTGCGTTCG GTCAGCCTGA TCGAGGAGGG CCACGGCCGG CGGGTGCGCA TGGGCAACCT GGCGTTCCTC GGTTCGCACC AGATCAACGG GGTATCGGCC TTGCACACCG AGCTGATGCG CGAAACCGTG TTCCATGACC TGCATCGCCT CTACCCGCAG CGCATCAGCA ACAAGACCAA CGGCGTGTCG TTCCGCCGCT GGCTGTTCCA GGCCAACCCG GGGTTGACCG AGCTGCTGGT GGAGACCCTC GGCGCCGACC TGCTGGACAC CCCGGAACGG CGCCTGCCGG ACCTCGAGGA GCACGTCGAG GACGCCAGGC TGCGGGCGCG CTTCGCCGAG CAGCGCCGGC AGAACAAGAC CGCCCTGGCG CGCCTGGTGC TGGACAGCCT CGGCGTGGCG ATCGAACCGG AAGCGCTGTT CGATGTGCAT ATCAAGCGTA TCCACGAATA CAAGCGGCAG TTGCTCAACC TGCTGCACAC CGTGGCGCTG TACCAGGAGA TCCGCAACGA CCCGACCGCC GACCGCGTGC CGCGGGTGAA GATCTTCGCC GGCAAGGCTG CCGCCAGCTA CCACCAGGCC AAGCTGATCA TCAAGCTGGC CAACGACATC GCCCGCACCA TCAACGACGA CCCCACCGTG CGCGGCCTGC TCAAGCTGGT GTTCCTGCCC AACTACAACG TCAGCCTGGC CGAGGCGATC ATTCCCGCGG CGGACCTCTC CGAGCAGATT TCCACCGCCG GGCTCGAGGC CTCCGGCACC AGCAACATGA AGTTCGCCCT CAACGGCGCG CTGACCATCG GCACCCTGGA CGGCGCCAAC GTCGAGATGA GCCAGCGGAT CGGCCTGGAA CACATGTTCA TCTTCGGCCT CAGCGCCCAG CAGGTGGAGC AGCGCCGGCA AGCCGGGGAG CTGGAGATGG GCGGGGTGAT CGCGGCCTCG CCGCGGCTGG AGGAAGCCCT GGAGGCGATC CGCAGTGGGC TGTTCTCGGC CGACGACCGC AGCCGCTACG AAGGGCTGGT GGACGGCCTG GTGCACGACG ACCGCTTCAT GCTCTGCGCC GACTTCGAGG CCTACTGGCA TGCGCAGTGC CGGGTCGAGG AAGTCTGGCG CGAGCCCGAT CGCTGGTGGC GCTCGGCGTT GCTCAACGTG GCGCGGATCG GCTGGTTCAG CGCCGACCGG ACGATCAGCG AATACGCCCG GGATATCTGG AAGCTATGA
|
Protein sequence | MPDSQDQTPS TVQTLKASIL AKLRYSVGRD PSTACPHDWF EAVALAVRDH IIDHWEEATP QGEAPARKRV YYLSLEFLIG RLLLDNLGNL GLLEETRQAL AELGVDLQRI VALEPDAALG NGGLGRLAAC FMESMASLDI PAHGYGIRYE HGLFRQVLTD GWQQEQTETW LDFGNPWEFE RPEVSYYIDF GGSVQVDSEH SGRAIWRPDE RIRAIAYDTP IVGWRRASVN TLRLWRARAE EDLQLDRFNA GDHIGAVVDV VKAESISRVL YPADSTEAGQ ELRLRQEYFF VSASLQDLLD RHLRHHHDLR SLPEQVAIQL NDTHPAIAVA ELMRQLVDVH QLAWPDAWAL SVATLSYTNH TLLPEALESW PVALMERLLP RHMQIIYLIN AFHIDALRAQ DIHDFDLLRS VSLIEEGHGR RVRMGNLAFL GSHQINGVSA LHTELMRETV FHDLHRLYPQ RISNKTNGVS FRRWLFQANP GLTELLVETL GADLLDTPER RLPDLEEHVE DARLRARFAE QRRQNKTALA RLVLDSLGVA IEPEALFDVH IKRIHEYKRQ LLNLLHTVAL YQEIRNDPTA DRVPRVKIFA GKAAASYHQA KLIIKLANDI ARTINDDPTV RGLLKLVFLP NYNVSLAEAI IPAADLSEQI STAGLEASGT SNMKFALNGA LTIGTLDGAN VEMSQRIGLE HMFIFGLSAQ QVEQRRQAGE LEMGGVIAAS PRLEEALEAI RSGLFSADDR SRYEGLVDGL VHDDRFMLCA DFEAYWHAQC RVEEVWREPD RWWRSALLNV ARIGWFSADR TISEYARDIW KL
|
| |