| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_35050 |
|---|
| Symbol | |
|---|
| ID | 4385322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3120434 |
|---|
| End bp | 3121891 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639325384 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790953 |
|---|
| Protein GI | 116050230 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00854172 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACG ATACGCTGCG GGTAAGGCTG CTCGCGTTCC TCTTCCTGAT TCCCCTGGCG
CTCTACGCCT GGTCCGCCGT GCAGGCCTTC CGGGTCGACT CGACCCTGCG CGACGAACAG
TTCATGCGCG ACTGGAGCGC CTCGGCGCGC AACGACCCGG ACGCCGCCGA CGCCATTCCC
CGTCACCTGT TCCGTCCGGC CTATGGCGTC GAAGGTCATC TTCACCAGTT CGCCGAAGAC
GCCGAGGCCA TCCGCCGCGA CCATCCTTGG CTGGCTCTGC GCGGCTGGCT GGCCGCTATC
GGCAAGCTCT GCGCGCTGGC GTCGGCGCTG GTCGCGGCCG CCTTGCTGGC GAGACTGGAA
TACGACGGGC GCCGCTCGAT GCGCTCGCAA GCCTACCTGC TCGGCCACCT CGCGCCGGCC
TGGCGGCGCC TCGGTCGACT GGTCCCGTTG CACGCCGGCC TGCTGGTCGC CGCCCTGGCC
AGCCAGTTGC TCTACGAAGC GCTGTGGAGC TACAGCCACT GGCACAGTCA CGGTTTCGTC
GCCCTGCTCT TCTCACTGCC GCTGTGGCTG CTGTTCCTCG GCGGCCTGCT CATGCTGCGG
CGCCTGCGCC GCGAACTGCT GCCGCTGGAG GAACCGGTGC TCCACCTGCT CGGCCGCGAA
CTCGACCGCG TCGCCGCGCC CGGCCTCTGG CAATGGCTGG GACAGATCGC CGACCGCGCC
GGAGCGCCGC TACCGGACCA TGTCGTCACC GGCATCGAGC ACTGCTACTT CGTCACCCAG
GCCAAGGTCC TGCTGGCGCC CCGCGGCATT CCGCTGGAGG GGCGTACCCT GTACATCCCG
CTGACCTACG CCACGGTCAT GAGCGAGGCC GAAAGCGCCG CGATCATCGG CCACGAACTG
GGCCACTTCG CCGCCGGCGA CACCGCCCAC GGCGCCTCCC TGTCGCTCCT GCAGCGGCAG
GTGCGCCTGC GCATCGAACG CATCGCCGCA CCCGAGGATG GGCGTGTCGG CCTGCTCGGC
AAGCCGGGCC TGTGGGCCGC GCTGTACTTC CTCGAACGCT TCGAGCGCGC CTACCTGCAC
TGGAATCGCC ACCAGGAACT GGCCGCCGAC AAGGTCGGGG CGCGGGTAGC CGGCGCGCGG
GTCTTCGCCA TCGCGCTGCT ACGCACCTGC GCCCTGGCAG GACTGATCGA ACGCCTGCTG
GCCAGCCCGC AGACGCGCAA CCTGGTGCAT GCGCTGACCG ACCATCTGCG CGGGAACTCC
CTGGAACTGG ACGAACAGGA CAGCGCGCGC CGCCTGGAAC ACCCCTTCGA CAGCCACCCG
CCGACCTACC AGCGGATCGC GGACCTTTCC CTGGCGCTCG ACGACGACCT GCTGCGACAG
GCAAGGCGCA TCGTCAGCGC CGACGACACG CAGTGGCTCA ACCGCCTGCT CGATGCAGGC
CACGGGGAAA GCCGATGA
|
|---|
| Protein sequence | MSHDTLRVRL LAFLFLIPLA LYAWSAVQAF RVDSTLRDEQ FMRDWSASAR NDPDAADAIP
RHLFRPAYGV EGHLHQFAED AEAIRRDHPW LALRGWLAAI GKLCALASAL VAAALLARLE
YDGRRSMRSQ AYLLGHLAPA WRRLGRLVPL HAGLLVAALA SQLLYEALWS YSHWHSHGFV
ALLFSLPLWL LFLGGLLMLR RLRRELLPLE EPVLHLLGRE LDRVAAPGLW QWLGQIADRA
GAPLPDHVVT GIEHCYFVTQ AKVLLAPRGI PLEGRTLYIP LTYATVMSEA ESAAIIGHEL
GHFAAGDTAH GASLSLLQRQ VRLRIERIAA PEDGRVGLLG KPGLWAALYF LERFERAYLH
WNRHQELAAD KVGARVAGAR VFAIALLRTC ALAGLIERLL ASPQTRNLVH ALTDHLRGNS
LELDEQDSAR RLEHPFDSHP PTYQRIADLS LALDDDLLRQ ARRIVSADDT QWLNRLLDAG
HGESR
|
|---|
| |