| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_34450 |
|---|
| Symbol | |
|---|
| ID | 4380397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3063779 |
|---|
| End bp | 3064684 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639325338 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_790907 |
|---|
| Protein GI | 116050276 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000000710752 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.295536 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGT CCAACCCGCT TGTCGATTGG TTATTAGACA GCCTCGAAGT CGACACCAGC
CTGTTCCATG TCGGTCGCTA CTGCGGCGGC TGGCATGCCT CCACCCACGG CCTGGCGCGT
GCCAGCTTCC ACCTGGTGGT GCAGGGACAC TGCTGGGCGC ACGTCGCCGG AAGCGCCCGG
GGCTGGCGAC TGGACAGCGG CGACGCGCTG TTCTTCCTGC GCGACGTCGA GTTCCGCCTG
TCCAGCGAGG CCACCGCCGA GGCCGCGCGC TGCCAGCCGC GCGGCGAAAT GCAGGCGCTG
GAGTGGAACG CGGCGGACGG TGCCGGCCTG GTCTGCGGGT TCTTCCACTT CCATTCGGGA
TTGTCCGGGC TGATCGTCGA CGCCCTGCCC GACTGGCTGA TCCTGCGCGC CGGCGATCCG
GCGCTGGACG CGGCGCGACG CCTGTTCGCC CTGATCGTCG ACGAGTGCCG CCGCCAGCCG
GCGCCGTCGC CGGTTCTGCT GGAGCGCCTC AGCCACCTGC TGTTCCTCTA CGTGTTGCGC
CAGCAGGTGC TCGACAACCC GACCCTCGGC GGCCTGGTGG CACTGGCCCG CCAGCCGCAG
TTCGCCGGCC TGCTGGAAGC GCTGATCGAG GCACCCGAAC AGCCCTGGAG CCTGGAACAG
ATGGCCGAAC GCACCGGACT CTCGCGCTCG GCCTTCTTCA AGCGCTTCAA CGAACTCAGC
GGTCAGTCGC CGGGACAGGT CCTGCTGGCC CTGCGCATGC ACCGCGCCTG CGCCCTGCTG
CGCGCCGACG CCAGCGTCGC CGAGGTCGCG GCGGCGGTCG GCTACCAGTC CACCGCCGCC
TTCACCCGTG CCTTCCACAA GGCCACCGGG CAGCAGCCGG GGGCCTATCG CAAGGCCAGC
CGCTGA
|
|---|
| Protein sequence | MNSSNPLVDW LLDSLEVDTS LFHVGRYCGG WHASTHGLAR ASFHLVVQGH CWAHVAGSAR
GWRLDSGDAL FFLRDVEFRL SSEATAEAAR CQPRGEMQAL EWNAADGAGL VCGFFHFHSG
LSGLIVDALP DWLILRAGDP ALDAARRLFA LIVDECRRQP APSPVLLERL SHLLFLYVLR
QQVLDNPTLG GLVALARQPQ FAGLLEALIE APEQPWSLEQ MAERTGLSRS AFFKRFNELS
GQSPGQVLLA LRMHRACALL RADASVAEVA AAVGYQSTAA FTRAFHKATG QQPGAYRKAS
R
|
|---|
| |