Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_32970 |
Symbol | |
ID | 4380534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2884539 |
End bp | 2885462 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325219 |
Product | transcriptional regulator |
Protein accession | YP_790788 |
Protein GI | 116050394 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00742357 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0000126002 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACAAAT TGAATGCCCT GGCGATGTTC GTCGCCACTG CCGAAACCGG TAGCTTCAGC CGTGGCGCCG AGCGCCTGGG CAAGACGCCC TCGGCGCTGA CCAAGGCCGT CGCCCACCTG GAAGCGGAAC TCGGTGCCCG CCTGTTCGAG CGCACCACCC GCAGCCTGGC GCTGACCGAG GCCGGGCAGA TCTACCTGGA GGCGGCCCGC CAGTCCCTGG AAACGCTGCG CACGGCGGGG CAGGAGATCG AACTGCTGGA GTCGGAGTTG CGCGGCGAAC TGCGTCTCGC CGCGCCGCCG TCGTTCGCCG CGGCGTTCCT CCAGCAGGCC TGCGCCAGCT TCCTCGAGGC GCATCCGCGG ATCAGCCTGC GGGTGGACCT CGACGAAACC TTCCTCGATC TCAGCGAAGG CGGCTACGAC CTCGGCCTGC GCGACGGCCC CATCGACCTG CCGGGGCTGG TGGCGCGGCC GCTGGCGCCG AACCAGATCG TGCTTTGCGC CAGCCCCGCC TACCTGGCGC GGCAACCCGC GCCGCAAGGC CCGGAGGACT TCGAGCGGCA CGCCTGGCTG GTCTTCCAGC ACCCTTCGCT GAACCAGAAC TTCTGGTGGA TGGAACGCGA CGGCGCCCGC CAGCGTATCG ACCAGCCGCG CCCGCGACTG GCCAGCGACA ACTACGACTT CCTGCTCGCC CACCTGCTGG CCGGGCTGGG CCTGCAGTTC TGTCCGCAGT GGAGTGTCGC GCCGCTGCTC GGCGAAGGGC GGTTGGTGCG CCTGCTCGGC GACTACCACT TCGACCCGGG GCCGTTCGGG CCCTCCATCC ATGTCCTCTA TCCGGGGCAC CGGCGCAACA CGCGGAAGGT CCGCGCGTTC CTCGAGCACC TGCGCGCCAG CTTGCAGCGA CAGGGGCTGT GCCATCGGCT GTAA
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Protein sequence | MDKLNALAMF VATAETGSFS RGAERLGKTP SALTKAVAHL EAELGARLFE RTTRSLALTE AGQIYLEAAR QSLETLRTAG QEIELLESEL RGELRLAAPP SFAAAFLQQA CASFLEAHPR ISLRVDLDET FLDLSEGGYD LGLRDGPIDL PGLVARPLAP NQIVLCASPA YLARQPAPQG PEDFERHAWL VFQHPSLNQN FWWMERDGAR QRIDQPRPRL ASDNYDFLLA HLLAGLGLQF CPQWSVAPLL GEGRLVRLLG DYHFDPGPFG PSIHVLYPGH RRNTRKVRAF LEHLRASLQR QGLCHRL
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