Gene PA14_32970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_32970 
Symbol 
ID4380534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2884539 
End bp2885462 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content70% 
IMG OID639325219 
Producttranscriptional regulator 
Protein accessionYP_790788 
Protein GI116050394 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00742357 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0000126002 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAAAT TGAATGCCCT GGCGATGTTC GTCGCCACTG CCGAAACCGG TAGCTTCAGC 
CGTGGCGCCG AGCGCCTGGG CAAGACGCCC TCGGCGCTGA CCAAGGCCGT CGCCCACCTG
GAAGCGGAAC TCGGTGCCCG CCTGTTCGAG CGCACCACCC GCAGCCTGGC GCTGACCGAG
GCCGGGCAGA TCTACCTGGA GGCGGCCCGC CAGTCCCTGG AAACGCTGCG CACGGCGGGG
CAGGAGATCG AACTGCTGGA GTCGGAGTTG CGCGGCGAAC TGCGTCTCGC CGCGCCGCCG
TCGTTCGCCG CGGCGTTCCT CCAGCAGGCC TGCGCCAGCT TCCTCGAGGC GCATCCGCGG
ATCAGCCTGC GGGTGGACCT CGACGAAACC TTCCTCGATC TCAGCGAAGG CGGCTACGAC
CTCGGCCTGC GCGACGGCCC CATCGACCTG CCGGGGCTGG TGGCGCGGCC GCTGGCGCCG
AACCAGATCG TGCTTTGCGC CAGCCCCGCC TACCTGGCGC GGCAACCCGC GCCGCAAGGC
CCGGAGGACT TCGAGCGGCA CGCCTGGCTG GTCTTCCAGC ACCCTTCGCT GAACCAGAAC
TTCTGGTGGA TGGAACGCGA CGGCGCCCGC CAGCGTATCG ACCAGCCGCG CCCGCGACTG
GCCAGCGACA ACTACGACTT CCTGCTCGCC CACCTGCTGG CCGGGCTGGG CCTGCAGTTC
TGTCCGCAGT GGAGTGTCGC GCCGCTGCTC GGCGAAGGGC GGTTGGTGCG CCTGCTCGGC
GACTACCACT TCGACCCGGG GCCGTTCGGG CCCTCCATCC ATGTCCTCTA TCCGGGGCAC
CGGCGCAACA CGCGGAAGGT CCGCGCGTTC CTCGAGCACC TGCGCGCCAG CTTGCAGCGA
CAGGGGCTGT GCCATCGGCT GTAA
 
Protein sequence
MDKLNALAMF VATAETGSFS RGAERLGKTP SALTKAVAHL EAELGARLFE RTTRSLALTE 
AGQIYLEAAR QSLETLRTAG QEIELLESEL RGELRLAAPP SFAAAFLQQA CASFLEAHPR
ISLRVDLDET FLDLSEGGYD LGLRDGPIDL PGLVARPLAP NQIVLCASPA YLARQPAPQG
PEDFERHAWL VFQHPSLNQN FWWMERDGAR QRIDQPRPRL ASDNYDFLLA HLLAGLGLQF
CPQWSVAPLL GEGRLVRLLG DYHFDPGPFG PSIHVLYPGH RRNTRKVRAF LEHLRASLQR
QGLCHRL