Gene PA14_32460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_32460 
Symbol 
ID4382675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2822349 
End bp2823116 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content73% 
IMG OID639325180 
Productputative transcriptional regulator 
Protein accessionYP_790749 
Protein GI116050432 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.144604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.396553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCGG CCCCCCTGCC CGTCCCGCTC TTCGCCCTGC GCATCGACCG CGCAGCCAGC 
CGCACGGCCT CCCACCGCCA TGCCTGCGGC CAGCTCTACT GCCTGGAGCG CGGCCTTCTG
GTGGTCGAGG ACGAGCATGG CCGCCAGGCC CTGCCTCCGC GCCAGATCGC CTGGATCCCA
CCGGGTCACC CACACTCGGC GCACTCCCAC GGCAGCCTGG CGGGCTGGAG CGCCTACCTC
GCCGCCGAAC ACTGCCGCGA CCTGCCCCGG CACCCCGGCG TGCTCGCCTG CTCGGCTTTC
GTGGCGCTGA TCGTCGAACG CGCCACCCGC TGGCCGCCGA CCGGCTCCGC CTGGAGCACC
GAACGCGAGA ACCTGCTGCG CGTGCTGCTG GACGAACTGC GCCACGCCGT GCCCCAGCGG
ACCCGCCTGC CCTATCCGGG AGATTCGCGC CTGCGCAGGA TCGCCGAGGC ATTGCTGGCC
AACCCCGGCG ATCCGCGGCC GGCGGCCGAA TGGGCGCGCT GGGCGGGCCT CAGCAGCCGT
AGCCTGAGCC GGCTGTTCGG CGCCGAGACC GGCATGAGCT TCGCGCAATG GCGGCAACTG
GCGCGACTGC ACGCGGCCGT CGAACGGCTG GCAGCGGGCC AGGCGGTCGG CGAGGTCGCC
TGGTCGCTCG GCTACGAAAG CCCGAGCAGC TTCGCCAGTG CCTTCCGCGC AGTATTCGGC
GAGACGCCGT CCGGCTATTC CAGTCGCGCC AACGAAGCGC TAGCCTGA
 
Protein sequence
MLPAPLPVPL FALRIDRAAS RTASHRHACG QLYCLERGLL VVEDEHGRQA LPPRQIAWIP 
PGHPHSAHSH GSLAGWSAYL AAEHCRDLPR HPGVLACSAF VALIVERATR WPPTGSAWST
ERENLLRVLL DELRHAVPQR TRLPYPGDSR LRRIAEALLA NPGDPRPAAE WARWAGLSSR
SLSRLFGAET GMSFAQWRQL ARLHAAVERL AAGQAVGEVA WSLGYESPSS FASAFRAVFG
ETPSGYSSRA NEALA