| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_32420 |
|---|
| Symbol | |
|---|
| ID | 4382678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2819974 |
|---|
| End bp | 2820993 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639325177 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_790746 |
|---|
| Protein GI | 116050435 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.366639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAG TGATCCGTTT TCATCAGTTT GGCCCGCCAG AGGTCCTCAA ATGCGAAGAG
CTGCCGACCC CGGCGCCGGC CGCAGGGGAA GTCCTGGTGC GTGTCCAGGC GATCGGCGTG
AGCTGGAAGG ATGTGCTCTG GCGTCAGAAC CTGGCCCCGG AGCAGGCTGC GCTGCCGTCC
GGTCTCGGCT TCGAACTGGC CGGCGAGGTG CTGGCGGTCG GCGCCGGCGT CGGCGACCTG
CCGCTGGGTT CCCGCGTGGC CAGTTTCCCC GCCCATACCC CCGATCATTA TCCGGCCTAT
GGCGACGTGG TGCTGATGCC GCGCGCGGCC CTGGCGGTCT ACCCCGAGGT ACTCACCCCG
GTGGAGGCCA GCGTCTACTA CACCGGCCTG CTGGTGGCCT ATTTCGGCCT GGTCGACCTG
GCCGGGTTGA AGGCTGGGCA GACCGTGCTG ATCACCGAGG CGGCGCGCAT GTACGGACCG
GTCTCGATCC AGTTGGCCAA GGCTCTCGGC GCGCGGGTGA TCGCTTCCAC CAAGTCCGCC
GAGGAGCGCG AGTTCCTCCG CGAGCAGGGC GCCGACAAGG TGGTGGTGAC CGACGAGCAG
GACCTGGTCC TGGAAGTCGA GCGCTTCACC GAGGGCAAGG GCGTCAATGT CATCCTCGAC
GAATTGGGCG GCCCGCAGAT GACCCTGCTC GGCGATGTCT CCGCCACCCG CGGCAAGCTG
GTGCTGTATG GCTGCAACGG CGGCAACGAG TCGGCGTTCC CGGCCTGCGC CGCGTTCAAG
AAGCACCTGC AGTTCTACCG CCACTGCCTG ATGGATTTCA CCGGTCATCC GGAGATGGGC
CTGGAACGCA ACGACGAGTC GGTGAGCAAG GCCCTCGCGC ACATCGAGCA ACTGACCCGC
GATCGCCTGC TCAAGCCGGT GGTCGACCGG GTATTCGAGT TCGACCAGGT GGTCGAGGCG
CACCGCTACA TGGAAACCTG TCCGAAGCGC GGCCGGGTGG TGATCCACGT CGCCGATTGA
|
|---|
| Protein sequence | MSRVIRFHQF GPPEVLKCEE LPTPAPAAGE VLVRVQAIGV SWKDVLWRQN LAPEQAALPS
GLGFELAGEV LAVGAGVGDL PLGSRVASFP AHTPDHYPAY GDVVLMPRAA LAVYPEVLTP
VEASVYYTGL LVAYFGLVDL AGLKAGQTVL ITEAARMYGP VSIQLAKALG ARVIASTKSA
EEREFLREQG ADKVVVTDEQ DLVLEVERFT EGKGVNVILD ELGGPQMTLL GDVSATRGKL
VLYGCNGGNE SAFPACAAFK KHLQFYRHCL MDFTGHPEMG LERNDESVSK ALAHIEQLTR
DRLLKPVVDR VFEFDQVVEA HRYMETCPKR GRVVIHVAD
|
|---|
| |