Gene PA14_30790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_30790 
Symbol 
ID4380606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2669920 
End bp2670819 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID639325050 
Producthypothetical protein 
Protein accessionYP_790619 
Protein GI116050562 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.316745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000000000195244 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGATC CGATCCGTCG CGGTACGCTG GAAATGACTT CGGCCATGCT GATCTGCGGC 
ACCATTGGCT GGCTGGTGCT GCTCTCCGGG CAGCCCGTGC TGGACGTGGT GTTCTGGCGC
TGCGTATTCG GTTTCGCCGC CCTGCTGGTC GCCTGTGCCG TGCTGGGCTT CCTGCGCCGC
GGCAGCCTGG GGCGCGAGGC GTTCCTGCTG GCGCTCCTCA GCGGGGTGTT CATCGTCGGC
AACTGGGTGT TGCTGTTCGC ATCCTACTCA CGGGCTTCGA TCGCCATCGG TACCGCGGTC
TACAACGTCC AGCCGTTCAT GCTGGTGGGG CTAGGCGCGG CGTTTCTCGG CGAGAAGGTC
ACGGCGCGCA AGCTGGGCTG GCTGGGGCTT TCGTTCGCCG GCATGCTGGC GATCGTCAGC
GCCCACGGCG ACAGCGACGC CCCGCGCGGG GACTACCTGT TCGGTATCCT CCTGGCGCTC
GCTGCCGCGC TGCTGTATGC CTTTGCCGCG CTGATCGTGA AGCGCCTGCA AGGCACGCCG
CCGCATCTTA TCGCCTTGAT CCAGGTGGGC ACCGGCGTGC TGATGCTCGC ACCGCTGGCG
AACCTTGCCG AACTGCCCCG GGGCGTTGCT CCCTGGGCCA GCCTGGCGAC CCTGGGAATC
GTCCATACCG GGCTGATGTA CGTGCTGCTC TACGGCGCCA TTCAGAAATT GCCGACGGCG
CTGACCGGTG CGTTGTCCTT TATCTATCCG GTCGCGGCGA TCCTGGTGGA CTGGCTGGTC
TTCGAACATC GCCTGAGCCT GGCGCAGTGG CTTGGCGTGG CCGCCATCCT GCTTGCCGCG
GCGGGCATGC AGCAGGGTTG GAGCGTGCGC CTGCCGGGGC CGGCAGTGCG GCGCGGCTGA
 
Protein sequence
MNDPIRRGTL EMTSAMLICG TIGWLVLLSG QPVLDVVFWR CVFGFAALLV ACAVLGFLRR 
GSLGREAFLL ALLSGVFIVG NWVLLFASYS RASIAIGTAV YNVQPFMLVG LGAAFLGEKV
TARKLGWLGL SFAGMLAIVS AHGDSDAPRG DYLFGILLAL AAALLYAFAA LIVKRLQGTP
PHLIALIQVG TGVLMLAPLA NLAELPRGVA PWASLATLGI VHTGLMYVLL YGAIQKLPTA
LTGALSFIYP VAAILVDWLV FEHRLSLAQW LGVAAILLAA AGMQQGWSVR LPGPAVRRG