Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_30710 |
Symbol | |
ID | 4380612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2664213 |
End bp | 2664746 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639325043 |
Product | putative activator of osmoprotectant transporter |
Protein accession | YP_790613 |
Protein GI | 116050568 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00174135 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000189108 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTTTTG AACAACTTGC CGAGCTGAGA GACCGTCTGC GCGCACAGGC GGCGCAGGCG AAACCGGCTC AAACCAAAAG CTCCGCGGGA CGCGCGAAGA AACGTGAAGC CGTCGAGCCG GGAGTCGAGG CTATCTGGAG GCTGCAACGG CATTTCCCGC TGGCGTTTCC GAAAAGCCCC GCGGCCAAGG TTCCGCTCAA GCAGGGCATC CTCCAGGATG CGCAGCAGCA CCTCGAGCTA CTGGGAATCA CCGCCGAACA ACTGAAACAG GCCATCGCCA CCTGGTGCCA GGGCAGCCGC TACTGGAGTT GCATGGTGGA AGATGCGCCG CGGCTGGATC TGCAAGGCCA GGTTGCCGGC AAGGTAACCG CCGAGCAGGC GGTGTATGCG CGGCGGCAGG CGTCTCGCCG GCAGCGCGAG CAGATGCGCG AGAAGCGCGC CAAGCGTGCC CAGGCAGGTA GCGAAGCGCC GGCCGCCACG GAGGCGCCGA CGCCTGAAGC GCCCGCAACC GAAGCGAGTC CCGAGGCGAA CTGA
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Protein sequence | MGFEQLAELR DRLRAQAAQA KPAQTKSSAG RAKKREAVEP GVEAIWRLQR HFPLAFPKSP AAKVPLKQGI LQDAQQHLEL LGITAEQLKQ AIATWCQGSR YWSCMVEDAP RLDLQGQVAG KVTAEQAVYA RRQASRRQRE QMREKRAKRA QAGSEAPAAT EAPTPEAPAT EASPEAN
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