Gene PA14_29520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_29520 
Symbol 
ID4380704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2560566 
End bp2560976 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content65% 
IMG OID639324948 
Producttype II secretion system protein 
Protein accessionYP_790520 
Protein GI116050660 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGT CGGTTACGCG CCCAAACGTT GACCAGGCCG CGTTCACCTT GCTCGAACTG 
CTGGTGGTGC TGGTGATCGT CGGGGCCATT GCTGCGGTGG CGTTGCCCGG CCTGGTGAGG
ATGCAGGAGA CCTGGGCGCG CAGGACCGCG CTGGACGATC TGTTCAATCA ATTGCAGACC
CTGGGCTATC GCGTGCGCAG CGACGGGCGG GAGCTGCTCA TTGATGAGAG CGGGGCGGTT
CCCGAGCAGT TGCTGCGACT GCCCGATGGC TGGACGGTTA CTGCTCGGCC GCCGATACGT
TACATGGCAA ACGGAGTTTG CCTGGGCGGA AAGTTGCAGG TCCATCATGG GCGCGCGACA
CATACGCTGC TGCTTCAGCC CCCCCTCTGC GCGCCCGGGA CGATCCGCTG A
 
Protein sequence
MPMSVTRPNV DQAAFTLLEL LVVLVIVGAI AAVALPGLVR MQETWARRTA LDDLFNQLQT 
LGYRVRSDGR ELLIDESGAV PEQLLRLPDG WTVTARPPIR YMANGVCLGG KLQVHHGRAT
HTLLLQPPLC APGTIR