Gene PA14_29100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_29100 
Symbol 
ID4384681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2517383 
End bp2517997 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content69% 
IMG OID639324913 
Producthypothetical protein 
Protein accessionYP_790485 
Protein GI116050695 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00136638 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGAAA CCTCGCTCTT CGTAGCCACC CTCGCCACCC TGGGCATGCT CTCGCCCGGC 
CCGGACTTCT TCCTGATCAT CCGCAACGCG GCGCGCTACC AGCGCTCGGC GGCGATGATG
ACCTCGCTGG GGGTGATCCT CGGCGTGGCC ACCCACATGG CCTACTGCGT CGCCGGCCTG
GCGGTGCTGA TCACCACCAC GCCGTGGCTG TTCAACGCGC TGAAGTACAC CGGCGCGGTC
TACCTGATCT GGATCGGCAT CCAGGCCCTG CGCTCGCGCG GCGGCGGCAC GCTCGACTTG
GCGGTCGGCG GCGTGCAGCG CGTCGGCCAC TGGAGCGCGT TCCTCCAGGG CTACCTGTGC
AACCTGCTCA ACCCCAAGGC CACGCTGTTC TTCCTCGCCG TGTTCACCCA GGTGCTGAGC
CTGGACTCCA GCTTCGCCGA GAAGCTCTGG TACGCCGGCA TCATCGTCGG CCTCGCCGCA
CTCTGGTGGC CGCTGCTGGT GGTGCTGATC CAGAGCGCGG TGGTGCGCCG TGGCCTGGCC
AGGGCCCAGG GGGTGGTGGA CAAGCTGCTC GGCGGCCTGC TGATCGCCCT CGGGGTCAAG
GTCGCCCTGA GTTGA
 
Protein sequence
MLETSLFVAT LATLGMLSPG PDFFLIIRNA ARYQRSAAMM TSLGVILGVA THMAYCVAGL 
AVLITTTPWL FNALKYTGAV YLIWIGIQAL RSRGGGTLDL AVGGVQRVGH WSAFLQGYLC
NLLNPKATLF FLAVFTQVLS LDSSFAEKLW YAGIIVGLAA LWWPLLVVLI QSAVVRRGLA
RAQGVVDKLL GGLLIALGVK VALS