Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_29100 |
Symbol | |
ID | 4384681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2517383 |
End bp | 2517997 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324913 |
Product | hypothetical protein |
Protein accession | YP_790485 |
Protein GI | 116050695 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00136638 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGGAAA CCTCGCTCTT CGTAGCCACC CTCGCCACCC TGGGCATGCT CTCGCCCGGC CCGGACTTCT TCCTGATCAT CCGCAACGCG GCGCGCTACC AGCGCTCGGC GGCGATGATG ACCTCGCTGG GGGTGATCCT CGGCGTGGCC ACCCACATGG CCTACTGCGT CGCCGGCCTG GCGGTGCTGA TCACCACCAC GCCGTGGCTG TTCAACGCGC TGAAGTACAC CGGCGCGGTC TACCTGATCT GGATCGGCAT CCAGGCCCTG CGCTCGCGCG GCGGCGGCAC GCTCGACTTG GCGGTCGGCG GCGTGCAGCG CGTCGGCCAC TGGAGCGCGT TCCTCCAGGG CTACCTGTGC AACCTGCTCA ACCCCAAGGC CACGCTGTTC TTCCTCGCCG TGTTCACCCA GGTGCTGAGC CTGGACTCCA GCTTCGCCGA GAAGCTCTGG TACGCCGGCA TCATCGTCGG CCTCGCCGCA CTCTGGTGGC CGCTGCTGGT GGTGCTGATC CAGAGCGCGG TGGTGCGCCG TGGCCTGGCC AGGGCCCAGG GGGTGGTGGA CAAGCTGCTC GGCGGCCTGC TGATCGCCCT CGGGGTCAAG GTCGCCCTGA GTTGA
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Protein sequence | MLETSLFVAT LATLGMLSPG PDFFLIIRNA ARYQRSAAMM TSLGVILGVA THMAYCVAGL AVLITTTPWL FNALKYTGAV YLIWIGIQAL RSRGGGTLDL AVGGVQRVGH WSAFLQGYLC NLLNPKATLF FLAVFTQVLS LDSSFAEKLW YAGIIVGLAA LWWPLLVVLI QSAVVRRGLA RAQGVVDKLL GGLLIALGVK VALS
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