| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_28810 |
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| Symbol | |
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| ID | 4380744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2480409 |
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| End bp | 2485532 |
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| Gene Length | 5124 bp |
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| Protein Length | 1707 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639324887 |
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| Product | putative DNA helicase |
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| Protein accession | YP_790459 |
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| Protein GI | 116050720 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0849671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000000181114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGCCAC TTCCTCAACC CAAGGGCCTG ATATTCGATC TTGAGGTAGT GCCGCCCAAG
AACAATCAAC CTGCCCGAAT CATGATGGTC GGTGCCCTTC GGCCTGACTT AGGGGCAGAG
TTGGAGCTGA AGGTCTCTGG AGACCCGTCC CCAGCTTTGC AGCAGCTGGA TGCACTGTCC
GACGGGGCGA GTTTCGTGCT CGGCCACAAT GTCATCGACC ACGATCTGCC TATCTTGCGC
GAACATTTTC CCGGCATGGC TTTGCATGCT CTGCCGGTCA TCGACACCCT GCGTCTGTCG
CCACTGGCGT TTCCACAAAA CCCGTATCAC CGGCTGATCA AGGATTACAA GCTTATCCGT
GACAGCCTCA ACTCGCCGTT GTCCGACTGC CGCTCGACGT TGGTTCTTTT TCTGGATCAA
CGCCAGGCCT TCACGCAGTT GAACGAGACC AACCAGACGG AGCTTCTCTG CTATCAGGCG
TTGCTGGCGC CGAGTATGCG GGGAGATCTG GGGGCTTTCT TCGCATCCCT GACTGGGCAG
TCTCCGGTGT CTGTACCCGA GCTCCGAGCG CGGTTTCCAC AATTGCTGCA AGAGACGGAT
CCAGCCCTTC AGCGTGACTT GAAGGTATGC CGAGCACGGC TTGAGCAACT ACTTGAGGAG
GATTTACAGC GGGAGGATCT GCATTGGCCG TTGGCCTACG CACTGGCCTG GCTCCGTGTA
TCTGGCGGCA ACTCGGTACT GGCGCCCTGG GTGCGACATC AGTTTCCAGA GGTTGGGCGG
CTAATCTCCG AGCTGCGTGA TATGCCGTGT GAGCGCGAGG ATTGTCAGTA CTGTCAGACG
ACTCATGACC CACGCCACGA GCTGAAGCGC TATTTCGGCT TCCCCGATTT TCGTTACGAG
GGTCCTGGAG AGAGTCTCCA GCACGATATA GTGCTGGCCG GCATGCGTGG TCAACACGTC
CTGGCCATCC TGGCGACCGG CGGGGGCAAG TCGCTGTGCT ATCAGTTGCC GGCGCTGAAC
CGGTTTCATC GTAACGGCAG CCTTACCGTC ATCGTCTCGC CGCTGCAGTC GCTGATGAAG
GATCAGGTCG ACGGGCTGCT GGAACGTAAC GTCCAGTGCG CCGCAGCGCT GAATGGCCTG
TTGACGATGC CGGAGCGCGC CGAGGTACTG GAGAAAATCC AGATGGGCGA TGTCGGCATT
TTGCTGGTAT CGCCCGAGCA GTTCCGCAAC AAGGCTTTCC GGCGAGCGAT CCGCCAGCGT
CAGGTCGGTG CCTGGATTTT CGATGAGGCG CATTGCCTGT CGAAATGGGG TAGCGACTTT
CGGCCAGACT ACCTGTATGT CTCCCGCTTC ATCCGGGTGT ACACCGGTGA TCAACCGCTG
GCGCAGATTG GTTGTTTTAC CGCGACGGCC AAGCCTGATG TGCTCGCAGA TATCCAGAGC
CATTTCAGGG AAAGCCTGGG CATTGAGTTC AAGGTGTTCC CCGGAGGGCA CGAGCGAACC
AATCTGCATT TTGATGTGCT GCCCTGCACC AAGGCAGAGA AGTGGTCGCG TACGGATGGA
TTATTGCGAG AGCACCTGGA CGCTCAGGAG GGCGGTGCAG TCGTCTTCGT TTCCAGTCGC
AAGAGTGCTG AGGAGCTGTC CGATTTCCTG ATTGGCCAAG GATGGCCTTG CAAGCACTTT
CATGCCGGTC TTGAGCCCAA CACCAAAACG GATATTCAGG ACGACTTCAA GGCTGGGCAA
CTGAGAATCA TCGTAGCTAC CAACGCCTTC GGAATGGGCG TGGACAAGGC TGATATCCGT
CTCGTCGTGC ATGCCGACAT ACCAGGTTCG CTGGAGAACT ACCTGCAGGA GGCGGGCAGG
GCTGGGCGTG ATCAGGGCGA TGCGCGCTGT GTGCTGTTGT ACGACCCGCA GGACATCGAA
ACCCAGTTCG GCATGAGCGA GCGCTCGAAG CTCAGCATCC GCGACATCCA GCAGATCCTG
CGCAAGTTGC GTAACGAGAG CAATCGGCGT AAGGGCGGCA AGCTGGTCAT CACGGCGGGT
GAAATCCTGC TGGACGATGA TGTTGAAACC AGCTTCTCCG CGGATGAGCG TGATGCCGAA
ACCAAGGTCG TTACGGCGGT TGCCTGGCTG GAGCGTGGTG ATTACCTCAA ACGTGAGGAA
AACCATACGC AGATTTTCCC GGCACGGCTG GATGTGAGCG AGGAAGAGGC CGAGAAGCGC
TTGCTGAAGG CCGAGTTGCC GCAACGTCGA TTGGAGGAGT TCAAGGCTAT TCTGCGCTTT
CTCTACGGCG CCGATGTTGA TGAACGGGTG AATACCGACC AGTTGATGCA GTTGACCAGT
CTGGAGTCGG AAGAGGTTGC CAGCGCACTC AAGCAATTGG AGGAGATGGG GCTGCTGGTC
AACGACTCGC AGATAACGCT GTATGTGCGC CATGGTGTGA CGGGGGCTTC CAGTCAACGC
CTTTCCAGCT CCCTGGAGCT GGAAAGGGCT TTGTTGCAAT GCCTGCCAGA GCAGGCACCG
GACGCCGAGC ATGGCGATTG GCAGGATTTG AATCTGCCGG CATTGACCGC TGAACTTAAG
TCCGCGACAG GGTTGGATGA ACTGCTCCCG CTGCATGTGC TGCGGCTGTT GCGCAGCCTG
GCCCAAGATC ATGATGCCGA TGATCAGCAG CGCAGTAGCC TTGAGCTCAG GCAACTCAAT
CGTGACTACC TCAAACTGCG TATCAAGGGT GGTCACTCCT GGGCGAAGAT TGTTGGCTTT
GGTGACGTGC GGCGTGCATT GGCTAGCAAG TTCCTGGAAC TGTTGGTCGG TAAGCTACCG
GCAGGATTGC GTGGCGCGGA TCTGCTGGTC GAAACGAGTT TTGGCGAATT GCTCCAGGTG
ATCGAAGGTG ACCTCGAACT GCCGCATCTG ATTCCGCCGA ACAGGCGCCG TAAGGTGATT
GAGCATGTCC TGCTTTATTT GCATCGGCAG GACATTTTGA CCCTCAACCA CGGCATGACG
GTCATGCGTC GGGCCATGAC CATCGAGGTC AAGAAGGAAG ACAAGCGTAA GACCTTCCTC
AAGGAGGACT ACTTGCGACT CGACGAGCAC TACCGCGAGA AGCGCATTCA GGTTCATGTG
ATGCGTGAAT ATGCGGAAGT GGCGCTGAAG GAGATGGCTG AGGCGTTGCG CCTGGTGCTG
GACTACTTCA CCGACTCCAA GCAGGCGTTT ATCAAGCGGC ATTTTAATGG GCGGGAGGAC
GTGCTCAAGC TGGCGACCAG CGAGGAGTCA TGGAAATCGA TTATCGAGTC GCTGAGCACT
ACTCAGAAAC TGATAGTCGC CGACGATGAC GACATAAATC GGCTGGTGCT GGCTGGGCCG
GGCTCCGGCA AGACACGTGT GATCGTGCAT CGCATCGCTT ACCTGCTGCG GGTGCGGCGA
GTACCAGCGA CCAGCATCGT GGCGTTGACC TTCAACCGCC ACGCGGCGAA CGAGATCCGC
AAGCGGCTGT TGGCCTTGGT CGGGGCCGAT GCCTACGGTG TCAGCGTCCT GACCTATCAC
AGCATGGCCA TGCGCTTGAC CGGCACCCGT TTCGAGCGAG GCGCGACGGT CGACGAGCGA
GCCCTCAAAC AAGTATTGAG CGATGCCGTC GAGTTGCTGG AGGGTAAGCG CAATATTGAG
GGCGAGGACG ACCTGCGCGA GCAGCTACTG CGCGGCTACC GTTACATCTT GGTTGATGAA
TACCAGGACA TCGACGACCT GCAATACCGT CTGGTCAGTG CTCTGGCTGG GCGGCACGCG
GAGGAAGATG GTCGGTTGTG CATCATGGCG GTAGGCGACG ATGACCAGAA CATCTATGCC
TGGCGCGATA CCAATAATCG TTATATCGAG CGCTTCCGCG AGGACTATGA GGCCTCGACC
AGCTTCCTGG TCGATAACTA TCGTTCTTCC CTGCGCATCA TTGAGGCGGC CAACCAACTC
ATTGGCCAGA ATTTGGCTCG ACTGAAAGAG GCCAATCCCA TCCGGATCGA CAGGGCTCGG
CAGGAGCTGC CCGCTGGCGG GCTATGGGAA GAGCGGGACG AGCAGCGGAA AGGTCAGGTA
ATGCGACTGC TGATCGACCC GAGCGACCGT GAGCAGGGCA ACCTGCAGGC ACAGGCGGCC
ATGGTGGAGT TGGGACGGTT ACTCGCGCTA GAACAGGGGA GCTGGAACGG CTGTGCGGTT
CTGGCTCGGA CGCACCGCTA TCTGTGGCCG ATCCAGGCTT GGTGCGAGCA GCACGATATT
CCTTATTTCC TGGCAGCAGA CAAGGAAACG GCGTTACCCA TTACTCGGCA GCGCAGTTTT
GTGGCTGCAA TCGACTATAT GCGAGAAATC AAAGGTGCTT TGTGCGCGGC TGACGCATGG
CAGCGTTTGT CGGGTAGCAA TCAACTGGTG GAAGCCGAGT GGAAGAGTTT TTTCCAGACG
GCCTTTGAGC AAATGCGAGG AGAATTGGGC GACTGCCAAC TTGGCAGTGG TGCCTTGATC
GACTGGCTGT ACGACTACGC CCGTGAATTG CGTCAACAGT CCAAGGACGG CCTCTATCTT
GGTACCGTGC ATTCGGCCAA AGGTCTGGAG TTCCGCCATG TCGTTCTGCT GGATGGTGGC
TGGAGCACGC AGGTCGATAC CCTGGCTGAT GAGCGACGTT TGTACTACGT GGGGGTGACG
CGAGCCGAAC AGACCCTGAC GTTGTGCGAA TTCGCTGACG GCAATCCATT CAGTCGCAGC
CTGATGAGAG ATGTTCAGCA GCATGAGTTT CAGGGACAAC CTCTTCCTGG GTTGGAGGTG
CGCTTTCAGC AACTCACGCT GAAGGAGATC GATATTGGTT TTGCCGGTCG TCAATCACCA
CATGCCCAGA TACACAAGGC CATTGAGGCG CTTCGCGAGG GCGATCCGCT GACGTTGAAG
GAAGAGGCTG GTCGGTATCA ACTGCTCGAC AGGCAAGGCA ACGTGGTTGG GCGAACCGCT
AAGTCATTCC AGCCACAGAT CGGCTTCGAT CAATGCGAAG TCGCAGCCGT CATGGTGCGG
TTTACTGAGG ATAGTGAGGA GCAGTATAGG GATTTGAATA AGTGTGAGCG CTGGGAGGTG
GTTGTGCCGA GGGGGAGAGG GTAG
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| Protein sequence | MSPLPQPKGL IFDLEVVPPK NNQPARIMMV GALRPDLGAE LELKVSGDPS PALQQLDALS
DGASFVLGHN VIDHDLPILR EHFPGMALHA LPVIDTLRLS PLAFPQNPYH RLIKDYKLIR
DSLNSPLSDC RSTLVLFLDQ RQAFTQLNET NQTELLCYQA LLAPSMRGDL GAFFASLTGQ
SPVSVPELRA RFPQLLQETD PALQRDLKVC RARLEQLLEE DLQREDLHWP LAYALAWLRV
SGGNSVLAPW VRHQFPEVGR LISELRDMPC EREDCQYCQT THDPRHELKR YFGFPDFRYE
GPGESLQHDI VLAGMRGQHV LAILATGGGK SLCYQLPALN RFHRNGSLTV IVSPLQSLMK
DQVDGLLERN VQCAAALNGL LTMPERAEVL EKIQMGDVGI LLVSPEQFRN KAFRRAIRQR
QVGAWIFDEA HCLSKWGSDF RPDYLYVSRF IRVYTGDQPL AQIGCFTATA KPDVLADIQS
HFRESLGIEF KVFPGGHERT NLHFDVLPCT KAEKWSRTDG LLREHLDAQE GGAVVFVSSR
KSAEELSDFL IGQGWPCKHF HAGLEPNTKT DIQDDFKAGQ LRIIVATNAF GMGVDKADIR
LVVHADIPGS LENYLQEAGR AGRDQGDARC VLLYDPQDIE TQFGMSERSK LSIRDIQQIL
RKLRNESNRR KGGKLVITAG EILLDDDVET SFSADERDAE TKVVTAVAWL ERGDYLKREE
NHTQIFPARL DVSEEEAEKR LLKAELPQRR LEEFKAILRF LYGADVDERV NTDQLMQLTS
LESEEVASAL KQLEEMGLLV NDSQITLYVR HGVTGASSQR LSSSLELERA LLQCLPEQAP
DAEHGDWQDL NLPALTAELK SATGLDELLP LHVLRLLRSL AQDHDADDQQ RSSLELRQLN
RDYLKLRIKG GHSWAKIVGF GDVRRALASK FLELLVGKLP AGLRGADLLV ETSFGELLQV
IEGDLELPHL IPPNRRRKVI EHVLLYLHRQ DILTLNHGMT VMRRAMTIEV KKEDKRKTFL
KEDYLRLDEH YREKRIQVHV MREYAEVALK EMAEALRLVL DYFTDSKQAF IKRHFNGRED
VLKLATSEES WKSIIESLST TQKLIVADDD DINRLVLAGP GSGKTRVIVH RIAYLLRVRR
VPATSIVALT FNRHAANEIR KRLLALVGAD AYGVSVLTYH SMAMRLTGTR FERGATVDER
ALKQVLSDAV ELLEGKRNIE GEDDLREQLL RGYRYILVDE YQDIDDLQYR LVSALAGRHA
EEDGRLCIMA VGDDDQNIYA WRDTNNRYIE RFREDYEAST SFLVDNYRSS LRIIEAANQL
IGQNLARLKE ANPIRIDRAR QELPAGGLWE ERDEQRKGQV MRLLIDPSDR EQGNLQAQAA
MVELGRLLAL EQGSWNGCAV LARTHRYLWP IQAWCEQHDI PYFLAADKET ALPITRQRSF
VAAIDYMREI KGALCAADAW QRLSGSNQLV EAEWKSFFQT AFEQMRGELG DCQLGSGALI
DWLYDYAREL RQQSKDGLYL GTVHSAKGLE FRHVVLLDGG WSTQVDTLAD ERRLYYVGVT
RAEQTLTLCE FADGNPFSRS LMRDVQQHEF QGQPLPGLEV RFQQLTLKEI DIGFAGRQSP
HAQIHKAIEA LREGDPLTLK EEAGRYQLLD RQGNVVGRTA KSFQPQIGFD QCEVAAVMVR
FTEDSEEQYR DLNKCERWEV VVPRGRG
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