Gene PA14_24040 details

Gene Information

• Locus tag: PA14_24040
• Symbol: xcpU
• ID: 4381100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa UCBPP-PA14
• Kingdom: Bacteria
• Replicon accession: NC_008463
• Strand: +
• Start bp: 2088051
• End bp: 2088569
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639324491
• Product: general secretion pathway outer membrane protein H precursor
• Protein accession: YP_790073
• Protein GI: 116051096
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01708] general secretion pathway protein H; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 55
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 63
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAGGCTT CGCGCGGCTT CACCCTCATC GAGCTGATGG TGGTGATGGT CATCATCAGC 
GTGCTGATCG GCCTGGCGGT GCTCAGCACC GGCTTCGCCA GCACCTCGCG GGAGCTGGAC 
AGCGAGGCCG AGCGGCTCGC CGGGCTGATC GGCGTGCTGA CCGACGAGGC CGTGCTGGAC 
AACCGCGAGT ACGGCCTGCG CCTGGAGCGC GATGCCTATC AGGTGCTGCG CTACGACGAA 
GCGAAGGCGC GCTGGTTGCC GGTGGCGCGC GACAGCCACC GCCTGCCGGA GTGGGCGGAG 
CTGACCTTCG AGCTGGACGG CCAGCCGCTG GTGCTGGCCG GCAGCAAGGG CGAGAAGGAG 
CAGAAGAAAG GCACCGACCA GCCGCAATTG CTGATCCTTT CCAGTGGCGA ACTCAGCCCG 
TTCCGCCTGC GCCTGGCCGA GCGCGGACCC GAGGGGCGGG CGTTGTCGCT GAGCAGCGAC 
GGTTTCCGCC TGCCACGGGT CGAGGTGGCG CGGCGATGA 

 

Protein sequence

MQASRGFTLI ELMVVMVIIS VLIGLAVLST GFASTSRELD SEAERLAGLI GVLTDEAVLD 
NREYGLRLER DAYQVLRYDE AKARWLPVAR DSHRLPEWAE LTFELDGQPL VLAGSKGEKE 
QKKGTDQPQL LILSSGELSP FRLRLAERGP EGRALSLSSD GFRLPRVEVA RR