Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23190 |
Symbol | |
ID | 4381167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2008779 |
End bp | 2009507 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639324421 |
Product | putative transcriptional regulator |
Protein accession | YP_790006 |
Protein GI | 116051163 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00144138 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGAAGC ATTCCCCCAC CGATCGCCTG CTGCAGATCC TCATTGCCCT TGGCCAGGCG CCCGAAGCCC TGTCTGCCAA GGAGCTGTCG CTGACCCTGG AGCAGCCGCT GAGCAGCACC TACCGGCACC TGAAGACCCT GTTGCGCTGG GGCCTGGCCG AAGAACAGGC CGGCCAGGGC CGCTACCTGC CCGGCCCGGC CTGCCTGCAA CTGGCGAAGA AATTCGATCG CGAGGCCTCG CTGATCGGTC TCGCCAAACC GGAACTCAAG CGCCTGGCCG ACCTGAGCCA GGAGAGCGTG GCGCTGATGG TGGCCAGCAA CCAGCAGGCG ATCTGCCTGG AACTGTTCGA CAGTCCGCAG CCGCTGCGCT GCTGCTACCA GAAAGGGCTG GCGCAGCCGC TGTTGCATGG CGCCTCGGCC AAAGCCCTGC TGGCGCACCT GGAGGACGAA CGGCGCGAGG AGCTGTACCT CGCCCAGGAA TTCTCCGCCG AGCGTATCGA CAAGCTGGAG CAGGAACTCC GGCTGATCCG CGAACAGGGC TACGCCGTCA GCCAGGGCGA GATCGACGAA GGCGTCTGGG GCATCAGCGT ACCGCTGCTG GACAGCCGCC AGCGCCTGCA CGGCGCCCTC AGCCTGATGG CCCCCGCCTT GCGCGCCCAG TCGCGCAGCG AACGCTTGCG GCAATGGACC CTCGACGCCG CCGCGCGACT TTCCGCGCGG CTGGACTGA
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Protein sequence | MSKHSPTDRL LQILIALGQA PEALSAKELS LTLEQPLSST YRHLKTLLRW GLAEEQAGQG RYLPGPACLQ LAKKFDREAS LIGLAKPELK RLADLSQESV ALMVASNQQA ICLELFDSPQ PLRCCYQKGL AQPLLHGASA KALLAHLEDE RREELYLAQE FSAERIDKLE QELRLIREQG YAVSQGEIDE GVWGISVPLL DSRQRLHGAL SLMAPALRAQ SRSERLRQWT LDAAARLSAR LD
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