Gene PA14_23190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_23190 
Symbol 
ID4381167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2008779 
End bp2009507 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID639324421 
Productputative transcriptional regulator 
Protein accessionYP_790006 
Protein GI116051163 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00144138 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGAAGC ATTCCCCCAC CGATCGCCTG CTGCAGATCC TCATTGCCCT TGGCCAGGCG 
CCCGAAGCCC TGTCTGCCAA GGAGCTGTCG CTGACCCTGG AGCAGCCGCT GAGCAGCACC
TACCGGCACC TGAAGACCCT GTTGCGCTGG GGCCTGGCCG AAGAACAGGC CGGCCAGGGC
CGCTACCTGC CCGGCCCGGC CTGCCTGCAA CTGGCGAAGA AATTCGATCG CGAGGCCTCG
CTGATCGGTC TCGCCAAACC GGAACTCAAG CGCCTGGCCG ACCTGAGCCA GGAGAGCGTG
GCGCTGATGG TGGCCAGCAA CCAGCAGGCG ATCTGCCTGG AACTGTTCGA CAGTCCGCAG
CCGCTGCGCT GCTGCTACCA GAAAGGGCTG GCGCAGCCGC TGTTGCATGG CGCCTCGGCC
AAAGCCCTGC TGGCGCACCT GGAGGACGAA CGGCGCGAGG AGCTGTACCT CGCCCAGGAA
TTCTCCGCCG AGCGTATCGA CAAGCTGGAG CAGGAACTCC GGCTGATCCG CGAACAGGGC
TACGCCGTCA GCCAGGGCGA GATCGACGAA GGCGTCTGGG GCATCAGCGT ACCGCTGCTG
GACAGCCGCC AGCGCCTGCA CGGCGCCCTC AGCCTGATGG CCCCCGCCTT GCGCGCCCAG
TCGCGCAGCG AACGCTTGCG GCAATGGACC CTCGACGCCG CCGCGCGACT TTCCGCGCGG
CTGGACTGA
 
Protein sequence
MSKHSPTDRL LQILIALGQA PEALSAKELS LTLEQPLSST YRHLKTLLRW GLAEEQAGQG 
RYLPGPACLQ LAKKFDREAS LIGLAKPELK RLADLSQESV ALMVASNQQA ICLELFDSPQ
PLRCCYQKGL AQPLLHGASA KALLAHLEDE RREELYLAQE FSAERIDKLE QELRLIREQG
YAVSQGEIDE GVWGISVPLL DSRQRLHGAL SLMAPALRAQ SRSERLRQWT LDAAARLSAR
LD