Gene PA14_21970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_21970 
Symbol 
ID4381247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1910972 
End bp1911688 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content69% 
IMG OID639324321 
Producttranscriptional regulator 
Protein accessionYP_789906 
Protein GI116051262 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000000109552 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGACG AAGCGCTACC CACCGTAACG GCGATCTGCC GGGCGCTCAG CGAGCAGATC 
GGCCATGGTC TGCTGCCGGC GGGTGGCAAG CTGCCGGCCG AGCGCAAGCT CAGCGAGCTG
TTCGCGACGA CCCGGATCAC CCTGCGCGAG GCGCTGATCC AGCTGGAGTC GCAGGGCCTG
ATCTACCGCG AGGAGCGCCG CGGCTGGTTC GTCTCCCCCG AGCGGCTGGC CTATAACCCG
CTGGTCCGCA GCCACTTCCA TGCGATGGTC AGCGAACAGG GCCGGGTGCC GGCGACCGAG
GTTCTGTCGG CCCGGCAGAT GCCGGCGAGC GCGGCGGTCT GCGAGCTGCT GGAGCTGCCG
GCGCTGTCCA GCGTCTACCA GATCCGCCGG GCGCGGCGGG TGGACGGGCG GCTGGTGCTG
TATGTCGAGC ACTACCTGAA CGCGCAGTAC TTCCCCGGAA TCCTCGGCCA CGACCTGACC
CGCTCGCTGA CCGAACTCTA TGCCAGCGAG TACGGCATCC ACTATGGGCG GGTGCGTTTC
GACATGGTGC CCACTGCACT GCATGCCGAG GCTGCGGCGC CGCTGAAGGT GGCGGTGGGC
AGCCCGGCCC TGCGCATCAG CCGGATCAAC CGCGACCAGC GTGGTCGGCT GATCGACTGC
GACCTGGAGT TCTGGCGCCA CGACGCCATC CATATCAGCG TCGAGGTACC GCAGTAA
 
Protein sequence
MRDEALPTVT AICRALSEQI GHGLLPAGGK LPAERKLSEL FATTRITLRE ALIQLESQGL 
IYREERRGWF VSPERLAYNP LVRSHFHAMV SEQGRVPATE VLSARQMPAS AAVCELLELP
ALSSVYQIRR ARRVDGRLVL YVEHYLNAQY FPGILGHDLT RSLTELYASE YGIHYGRVRF
DMVPTALHAE AAAPLKVAVG SPALRISRIN RDQRGRLIDC DLEFWRHDAI HISVEVPQ