Gene PA14_21890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_21890 
Symbol 
ID4381254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1904389 
End bp1905351 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content70% 
IMG OID639324314 
Productputative oxidoreductase 
Protein accessionYP_789899 
Protein GI116051269 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00000278447 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACGCAT TGCAAGGTAT CGAAGGTCGT GTCGAGTGGT CGGAAATCGC CGCCCCGTCC 
TGCGGTCAGG GCGAAATCCG CATCCGCGTG GCGGCCGCCG GACTCAACCG CGCCGACCTG
TTGCAGAAGG CCGGGCTCTA CCCGCCGCCA CCCGGCGCCA GCCCGGCGCT GGGGCTCGAG
TGTGCGGGTG TGGTCAGCGA GGTGGGCGCG GGCAGCACCT GGCAGGTCGG CGACCGGGTC
TGCGCGCTGC TCGCCGGCGG CGGCATGGCC GAGGAAGTGG TGGTGGACGC GCGCCACGTA
CTGCCGGTCC CGGCAGGGCT GAGCCTGGCG GAGGCGGCGG GGATTCCGGA GGTCTACGCC
ACGGCCTGGC TGAACCTGTT CCAACTGGCG GCGTTGCAGC CCGGCGAGAA AGTGCTGCTG
CACGCCGGCG CCAGCGGCGT CGGTTCGGCC GGCATCCAAC TGTGCAAGGC GTTCGGCAAC
CCCTGCTGGG TCAGCGTCGG TTCTGCCGAA CGCCTGGCCT ACTGCGAATC CCTGGGCGCC
GCCGGTGGCG CGCTGCGCAA GCAGAGCCTG GAATCGCTGC GCGATTTCGC CCCGTTCGAC
GTGATCCTCG ACCCGGTCGG TGCCCGCTAT GCCGGGTTGA ACCTGGAGCT GCTGCGGAGC
GACGGGCGCT GGGTGATCAT CGGCCTGATG GGCGGCCGCG AGGCGCAACT GGACCTGGCA
CAACTGCTAG GCAAGCGTAT CCAGTTGACC GGCTCGACCC TGCGTACCCG CGATACCGAG
TTCAAGGCGC AACTGATTGC CGAGCTGGGG TTGAAGGTCT GGCCATTGTT CTCCGCCGGG
AAACTCCGTG CGCAGCTGGA GCGAACCTTC CCGATCGGCG ACGCCGAGGC GGCGTTCGAG
GCGCTGGCGA GCAACCAGGT GCAGGGCAAG GTCGTGCTGG TGGTGGACCC ATCGCTGGCC
TGA
 
Protein sequence
MNALQGIEGR VEWSEIAAPS CGQGEIRIRV AAAGLNRADL LQKAGLYPPP PGASPALGLE 
CAGVVSEVGA GSTWQVGDRV CALLAGGGMA EEVVVDARHV LPVPAGLSLA EAAGIPEVYA
TAWLNLFQLA ALQPGEKVLL HAGASGVGSA GIQLCKAFGN PCWVSVGSAE RLAYCESLGA
AGGALRKQSL ESLRDFAPFD VILDPVGARY AGLNLELLRS DGRWVIIGLM GGREAQLDLA
QLLGKRIQLT GSTLRTRDTE FKAQLIAELG LKVWPLFSAG KLRAQLERTF PIGDAEAAFE
ALASNQVQGK VVLVVDPSLA