| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_21520 |
|---|
| Symbol | |
|---|
| ID | 4381307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1866255 |
|---|
| End bp | 1866758 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639324278 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_789865 |
|---|
| Protein GI | 116051303 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.0847336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGCC TGTTCTTCCG GAGCCGACTA CCGATGCGCC AGGCCCTGCT GATCGTCGAC
GTGCAACCCT GTTTCGCCCC GCCGGACTGG CTGCTGGAAG GCATCGGCCA ACTGCTCGGG
CGGATGCCCT CGGTGGCCAG CGTCGAGCGC CATGACGAGT CGCGTACGCC GTTCCAGCGC
CAGCTCGGCT GGCGACCCCC GCTCGACGAT GCCTGCCTGG TGGCGGCCGA CCGGGTCTTC
GTCAAGCATG GCTACCTGCC GACGGCGGAA CTCGTCGACC ATCTGCGTGC GCTGCGAGCG
GAACGGGTGC TGGTCTGCGG CATCCAGGCC GACACCTGCG TGCTCGCCGC CGGCTTCGCC
CTGTTCGACG CCGGCCTGCA ACCGACCCTG GTCGGCGACC TGGTGCTCGG CTCCTCGCTG
GATCGCTCGG GGGAGCTGGG TGTGCGCCTG TGGAAGCATC ATTTCGGCCA GGTCGTCAGC
CTGGCCGAGG TGCTGGCGGA TTGA
|
|---|
| Protein sequence | MPGLFFRSRL PMRQALLIVD VQPCFAPPDW LLEGIGQLLG RMPSVASVER HDESRTPFQR
QLGWRPPLDD ACLVAADRVF VKHGYLPTAE LVDHLRALRA ERVLVCGIQA DTCVLAAGFA
LFDAGLQPTL VGDLVLGSSL DRSGELGVRL WKHHFGQVVS LAEVLAD
|
|---|
| |