Gene PA14_17820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_17820 
Symbol 
ID4381556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1531236 
End bp1532423 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID639323984 
Producthypothetical protein 
Protein accessionYP_789572 
Protein GI116051590 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC AGACGGGCGC CCTGCGTGGC CTGAAAATCA TCGATCTCAG CCGGGTCCTC 
GGCGGACCCT ACTGCTCCCA GGCGCTGGCC GACCACGGCG CCGAGGTGAT CAAGCTGGAA
CCCCTCGGCG GCGACGAGAC CCGTGGCTGG GGGCCGCCCT TCGAGGGCGA CACGGCGTCC
TACTTCAAGG GCGTGAACCG CAACAAGAAG GGCATCGCCG TCGACCTGGC GACGGCGGAG
GGCATCGAGC TGCTGCTGCG CTTGCTGGAG GACGCCGACG TACTGCTGGA GAACTTCAAG
CCCGGCACCC TGGCGCGTTG GGGGATCGGC TACGAGGAGG TGCTTCGCCA GCGCTTCCCA
CGGCTGGTCC ACTGCGCGGT ATCGGGCTTC GGCGCCGACG GCCCGCTCGG CGGCCTGCCC
GGCTACGACG CGGCGATCCA GGCTATGGCC GGACTGATGA GCGTGAACGG CGAGGCCGGC
GGCGACGCGT TGCGCATCGG CCTGCCGATC GTCGACATGG TCACCGGGCT GAACGCCATG
GCCGGCATCC TCCTCGCCCT CCACGAGCGC CAGGTCAGCG GGCGCGGGCA GTCGGTGGAC
ATCGCCCTGT ACGACTGCGG TATCTCCCTG CTGCACCCGC ACCTGCCGAA CTACTTCGCT
TCCGGACGTA CGCCCCGGCG TAGCGGCAAC GCCCATCCGA ACATCGCGCC CTACGACAGC
TACCGCACCG GTACCGAGCC GATCTTCCTC GCCGTCGGCA ACGACCGCCA GTTCGCCCGC
CTGTGCGAGT ACCTGGGAGC CGATGAACTG CCGGGGGACC CGCGCTTCGC CGACAACGGC
AAGCGCTCGG TCAACCGCGA GGCGCTGAAG CGCGCCCTGG AGGACTACCT GGCGGCCCAC
GACGGTCGCG AGCTGGCCGA GCTGCTGATC CGTCTCGGCG TGCCCTGCGG AGTGATCGCC
ACGGTGGATC GGGTGGTGGA ACACCCGCAC ACCCGCCATC GCGGGATGGT CGTCGAACTC
GAGGGCTATC GCGGCATCGC CTCGCCGGTG AAGCTTTCGC GCACCCCGGC CAGCTACCGC
GCCACGCCGC CGGTACTGGG CGGAGACACC CGGGAAGTCC TGGCGGAACT GGGATTGAGC
GCCGAGGCGA TCGACGCGCT GGTCCGGCGC GGCATCGTCC GCGCCTGA
 
Protein sequence
MTNQTGALRG LKIIDLSRVL GGPYCSQALA DHGAEVIKLE PLGGDETRGW GPPFEGDTAS 
YFKGVNRNKK GIAVDLATAE GIELLLRLLE DADVLLENFK PGTLARWGIG YEEVLRQRFP
RLVHCAVSGF GADGPLGGLP GYDAAIQAMA GLMSVNGEAG GDALRIGLPI VDMVTGLNAM
AGILLALHER QVSGRGQSVD IALYDCGISL LHPHLPNYFA SGRTPRRSGN AHPNIAPYDS
YRTGTEPIFL AVGNDRQFAR LCEYLGADEL PGDPRFADNG KRSVNREALK RALEDYLAAH
DGRELAELLI RLGVPCGVIA TVDRVVEHPH TRHRGMVVEL EGYRGIASPV KLSRTPASYR
ATPPVLGGDT REVLAELGLS AEAIDALVRR GIVRA