Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_15650 |
Symbol | |
ID | 4381305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1330245 |
End bp | 1331201 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639323804 |
Product | hypothetical protein |
Protein accession | YP_789392 |
Protein GI | 116051769 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000726726 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 5.71915e-19 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAAAA CTCCTATCTT CTATCGCGAT CGTCCAGCAT CAATGGATCC TCTCTCCGAA GTCCTTTCCC TGGTCAACAG CCAGGACTCC TCCTTCGGCG CCCTGAAGAC CGGCGGCGAT TGGGCACTCC GCTTTCCGGC ACCGGAAGGT GTGAAGTTCA ACGTGGTAGT CCGTGGCGCT TGCCTGCTGG CCACCGACGG CATGGAAGAG CCGATCCGAC TGGAAGCGGG CGACTGCTTT CTGGTGTCCT GCCGCAGTCC GCTGCTGGTC GGCAGCGATC TATCCCTTCC CGCCGCCGAC GCCACGCTGC TCTACCGAGA TGCCCCTGAC GGCGTCGCGC ACTATGGGGA AAGCGAGGAT TGTTTCCTGA TCGGCGGTCG CTTCGCCTTT GGCGAAGAAG CCAACCTGCT GTTCGACGGG CTGCCTCCGG TGACCGTCGT GAAAAGCGAT TCGGACCAGG CATCCGTACT GAGCTGGGCG CTGCACCGAC TGGCCCATGA GTTTTCCTGC CCGTCACCCG GTAGCGCGCT GATCGCTCGC CACCTGGGCC ACATCATGCT GGCGCAGGTG CTGCGGCTCT ATCTCGCCGG CGAGGGCAGC GACACGCCCA GTTGGCTGCT GGCGTTGTCC GATCCGCGCA TAGGCGCGGC GATCCGGGCG ATCCACGCCG AGCCGGCCAA AGTCTGGACG GTCGAGCGCC TGGCCGACGT AGCGGGTACC TCGCGCTCCA CGCTGGCCCT GCGTTTCAAG CAAACCGCGG GACTGGCGCC GCTGGAATAT GTATCGCACT GGCGTATGCA ATTGGCCGCT CGCGCCCTGC GCGACAGCAA AGCGACGATT TCCTCGATCG CGCAAACCCT GGGCTACGGC TCGGACAGCG CTTTCAGCAA CGCCTTCAAA CGCATCATGA AATGCTCGCC CAGAGACTAT CGCAGCCGGC AGGCCAGCAG GGCATAG
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Protein sequence | MQKTPIFYRD RPASMDPLSE VLSLVNSQDS SFGALKTGGD WALRFPAPEG VKFNVVVRGA CLLATDGMEE PIRLEAGDCF LVSCRSPLLV GSDLSLPAAD ATLLYRDAPD GVAHYGESED CFLIGGRFAF GEEANLLFDG LPPVTVVKSD SDQASVLSWA LHRLAHEFSC PSPGSALIAR HLGHIMLAQV LRLYLAGEGS DTPSWLLALS DPRIGAAIRA IHAEPAKVWT VERLADVAGT SRSTLALRFK QTAGLAPLEY VSHWRMQLAA RALRDSKATI SSIAQTLGYG SDSAFSNAFK RIMKCSPRDY RSRQASRA
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