| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_15620 |
|---|
| Symbol | |
|---|
| ID | 4381698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1328012 |
|---|
| End bp | 1328974 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639323802 |
|---|
| Product | oxidoreductase |
|---|
| Protein accession | YP_789390 |
|---|
| Protein GI | 116051771 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000160845 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 2.2896399999999997e-20 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTATCA GGCAAACCCC CATCAATTCG GGATTCGGAG CGAAAACGCA GGCCAGCGAG
GTGATGGCGG GGCAAGACCT CTCCGGAAAG ACCGCCATCG TGACCGGCGG CTACTCCGGT
CTTGGCCTGG AAACCACGAA GGCGCTGGCC TACGCGGGCG CGCGGGTCAT CGTTACGGCG
CGCAGACCGG ATGTGGCAAG GGAGGCGCTG CTCGGGCTCG ACGAAGTCGA GGTGCAGGCG
CTCGACCTGG CCGAGTTGGC CTGCGTGCGT CGGTTCGCCG AGGCCTTCTC CGCCTCGCGC
CGTCGTGCCG ATATCGTCAT CAACAACGCC GGTGTGATGG CCTGTCCTGA GACCCGCGTA
GGCCCGGGCT GGGAGGCGCA GTTCGCGACC AATCACCTTG GCCACTACGC CCTGGTGAAC
CTCTTGTGGC CGTCGCTCGC GGACGACGCG CGAGTGGTCG CCGTGTCCTC CGCCGGGCAC
CACTACTCGG CGATCCGCTG GGACGACGTG CAGTTCGAAC GGGGCTACGA CAAGTGGCTG
GCTTATGCGC AGTCGAAGAC TGCCAACGCC CTGTTCGCCA TCCAGTTGGA TGCGCTGGGT
CGCGAGAGGG GTGTGCGTGC CTTCGCAGTG CATCCGGGCA GCATCGCCAC ACCGTTGCAA
CGCCATGTTC CACGGGCGGA GATGATCGCC CTGGGCTGGA TGGACGAAGC CGGCAATCCG
GCCAGCCCCG ATACGCTCAA GACCCCGCAG CAGGGGGCTG CCACCCAGCT ATGGGCTGCG
ACCTCTCCGC TGTTGGCGGG GATGGGCGGG CTCTACTGCG AGGATTGCGA CATCGCAGGC
GTCGCGCCGG ACGACTCGCG CACCCTGGCC GGCGTACGCG AACATGCGAT CGATCCGGAG
CAGGCCCGCC GCCTCTGGAG GCTTTCGGCG ACGCTCACCG GGATCGACGC ATTCGCGTCC
TAG
|
|---|
| Protein sequence | MTIRQTPINS GFGAKTQASE VMAGQDLSGK TAIVTGGYSG LGLETTKALA YAGARVIVTA
RRPDVAREAL LGLDEVEVQA LDLAELACVR RFAEAFSASR RRADIVINNA GVMACPETRV
GPGWEAQFAT NHLGHYALVN LLWPSLADDA RVVAVSSAGH HYSAIRWDDV QFERGYDKWL
AYAQSKTANA LFAIQLDALG RERGVRAFAV HPGSIATPLQ RHVPRAEMIA LGWMDEAGNP
ASPDTLKTPQ QGAATQLWAA TSPLLAGMGG LYCEDCDIAG VAPDDSRTLA GVREHAIDPE
QARRLWRLSA TLTGIDAFAS
|
|---|
| |