Gene PA14_12440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_12440 
Symbol 
ID4384061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1071822 
End bp1072469 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content73% 
IMG OID639323555 
ProductAcrR family transcriptional regulator 
Protein accessionYP_789144 
Protein GI116052013 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.446651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTATC GTGTCACCGA ACGCCGCCTG CAACGCGATT CCGCGCTGCG CGAGCGCATC 
CTCCAGCTAG GCCTGCGGCG TGTCGCGGAG GGCGGTTTCG CCGCGCTGAC CATGCAGGCC
CTGGCCGACG ACGCGGGGAT CGCCACCGGC AGCCTGTACC GCCACTTCCG GGGCAAGGGC
GAGCTGGCGG CGGAAATCTT CCGCCGCGCC AGCCAGCGTG AGGTCGATGC CCTGGCCGTG
GTCCTGCGCG GTCCCGGCGC GCCCGCCTGG CGCCTGGCCG AGGGCTTGCG GCGCTTTGCC
GCGCGCGCCT GGAGCAGCCA GCGGCTGGCC TTCGCCCTGA TCGCCGAGCC GGTGGATCCT
GAAGTCGACG AGCAGCGCCT GCGCTATCGC GAGGCCTACG CCGCACTGTT CGTCGAACTG
CTCGAGGAGG GCCGGCGCAG TGGCGCATTC CAGCTTTCCC TGGTGCCGCT TGCCGCGGCC
TGCCTGGTCG GGGCCATCGC CGAGGCGCTG GTCGGCCCCT TGTCTCCCCC GGCGCGCGCC
GCTCGCGACA GCGGCCAGCC GGAACCGAGT CTGGAGCCGG TGAGTACGGC TCTGGTGAAC
TTCTGCCTGC GCGCGGTGGG CGCGCCTGTC TGCGAGGAAC CCTCATGA
 
Protein sequence
MVYRVTERRL QRDSALRERI LQLGLRRVAE GGFAALTMQA LADDAGIATG SLYRHFRGKG 
ELAAEIFRRA SQREVDALAV VLRGPGAPAW RLAEGLRRFA ARAWSSQRLA FALIAEPVDP
EVDEQRLRYR EAYAALFVEL LEEGRRSGAF QLSLVPLAAA CLVGAIAEAL VGPLSPPARA
ARDSGQPEPS LEPVSTALVN FCLRAVGAPV CEEPS