| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_11080 |
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| Symbol | cupB3 |
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| ID | 4382073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 958480 |
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| End bp | 961014 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639323447 |
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| Product | usher CupB3 |
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| Protein accession | YP_789036 |
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| Protein GI | 116052120 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTTG CGTCACCGGC CGGCGGGTTG GACGCACCGT CGCGGCGGAT CGTCTTCGAC
GCGCAGATGC TGGCCCTGGG GCCGGGCGGA CGCTCGATCG ATACATCGCG TTTCGAGCGC
GGCGACGTCA TCGAGCCAGG CCGCTATCGC CTCGACCTGC TGCTCAACAG CCGATGGCGC
GGTGTCGAGG AAGTCGAGCT GCGCCGCCAG CCGGGGCGGG AAAGCGCGGT CTTCTGCTAC
GACCGGGGCC TGCTGGAGCG GGCGGGCATC GACCTGGAGA AGAGCGCGCG TGGCCAGGAT
CGTTCCTCGG CTCGCGATCC TCTGCCCGAA GGTTTGCACT GCGACCCTCT CGAGCGCTAT
GTGCCGGGGG CCCGGGTCAA GCTCGATATC GCCGAGCAGT CGATCTATAT CTCGGTGCCC
AGCTATTACC TGAGCCTGGA TTCGTCGAAG ACCTATGTCG ATCCGGCGAG CTGGGACAGC
GGCATTTCCG CCGCCTTGCT CAACTACAAC AGCAATCTCC ACGTCAGGGA AAACCACGGC
AGGAGCGCCA CCAGCGGCTA TGCCGGGATG AACGCCGGCT TCAATTTCGG GCGGGCGCGC
CTGCGCCACA ACGGCACGGC CACCTGGTCG CGCCGCATGG GCAGCCATTA CCAGCGTAGC
GCAACCTATG TGCAGACCGA CCTGCCGGCC TGGCGTGCGC AGTTATTGCT GGGAGAAAAC
TCCACCAGCA GCGAGTTCTT CGATGCGGTG TCCTTCCGTG GCGTGCAGCT TTCCAGCGAT
GACCGGATGC TGCCGGATTC GCTGCGCTAC TACGCTCCGG TGGTCCGTGG GACCGCCAGT
ACCAATGCGC GGGTATCGGT CTACCAGCGT GGCTACCTCA TCTACGAAAC CACGGTGGCA
CCCGGGGCGT TCGCTCTCGA CGAACTGCAG ACCGCCAGCT ATGGCGGGGA CCTGGAAGTG
CGGGTGACCG AAGCCAGCGG GGAAGTCCGC AGTTTCATCG TGCCGTTCGC CACCACCGTA
CAACTGCTGC GCCCCGGGAC CACGCGCTAC AGCCTGACGG CCGGGCGGCT CAACGATCCC
AGCCTGGAGC GTCGCCCGAA CATGCTGCAG GGCGTCTACC AGCGCGGCCT GGGCAACGAC
GTCACCGCAT ACGCGGGCGG GGCCTTCACC GGCAGCTACA TGTCCGGGTT GATGGGCGCG
GCGCTGAACA CGCCGGTGGG CGGATTCTCC GGTGACGTGA CGCTGGCGCG TACCGAGGTT
CCCGGCGACG ACCGCCTTAG CGGCTCCAGC TACCGTCTCG CCTACAGCAA GAACCTGCCG
AACACCGGCA CCAACTTTTC GCTGCTCGCC TATCGTTACT CCACCGGTGG CTATCTCGGC
CTGCGCGACG CGGCCTTCAT GCAGGACCGG GTAGAGCGAG GCGAGCCGCT GGAGTCGTTC
TCGCGCTTGC GCAACCGTCT CGACGCCAAC ATCAGCCAGC AACTGGGCAA CGGCGGCAAC
CTGTACCTGA ACGGCTCCTC GCAGCGCTAC TGGAGCGGCG GCGGGCGGGC GGTCAACTTC
TCCGTCGGCT ACAGCAACCA GTGGCGCGAC GTCAGTTACT CCATTTCCGC GCAACGCCTG
CGCAGCCACT ACGAAGGCTT TTCCAGCGGT GACAAGCGCG GCGAGACCAG CACGCTGTTC
AGCCTGAACC TGTCCATTCC GCTGGGCGGC GCGGGACGCG GGTCGCCGAC CCTGAGCAGC
TACCTGACCC GCGACAGCAA CAGCGGAACC CAGCTCACCA GCGGGGTTTC CGGCATGCTG
GGCAAGCGTG GCGAGGCCTC CTACTCGCTG TCGGCCTCCC ATGACCGCGA CAGCCGGCAG
ACCTCGAAGA GCGCCAGCCT CGACTATCGA CTGCCGCAGG TCGAACTCGG CTCCAGCCTC
TCGCAGGGAC CGGGCTATCG GCAGTTGTCG GTCAAGGCCG CGGGGGGCCT GGTCGCGCAC
AGCGGCGGGA TCACCGCGGC ACAAACCCTG GGCGAGACGA TCGGCCTGGT CCACGCGCCA
AACGCCAGGG GCGCGGGTGC CGGCTACTCG GGAAGCCGGG TCGACCGCCA CGGCTATGCG
GTGATTCCCA ACCTGCTGCC CTACCAGTTG AACAGCGTCG ACCTCGACCC CAACGGCATG
GCCGACGAGA TCGAGCTGAG GTCCAGTTCG CGCAACGTGG CGCCCACCGC CGGAGCTGTG
GTGCGCCTCG ACTATCCGAC GCGGGTGGCG AGGCCCTTGC TGGTGGATAG CCGGATGCCC
AGCGGCGAGC CCCTGCCGTT CGCCGCGGAA GTGCTCGATG CCCACAGCGG GCAGCCGGTG
GGCGCCGTCG GCCAGGGCAG CCGCCTGGTG CTGCGGGTCG AGCAGGATCG CGGCTCGGTT
CGGGTGCGCT GGGGCAACGA GCCGCAGCAG CAGTGCCTGG TCGACTATGC GCTGGGCCCG
CGCGAGACGA CGCCTCCCGT CCTGCAACTG GCATGTCGCC CGGCGTCGGC CGCCGACCGG
GAGCGCACGC TGTGA
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| Protein sequence | MAVASPAGGL DAPSRRIVFD AQMLALGPGG RSIDTSRFER GDVIEPGRYR LDLLLNSRWR
GVEEVELRRQ PGRESAVFCY DRGLLERAGI DLEKSARGQD RSSARDPLPE GLHCDPLERY
VPGARVKLDI AEQSIYISVP SYYLSLDSSK TYVDPASWDS GISAALLNYN SNLHVRENHG
RSATSGYAGM NAGFNFGRAR LRHNGTATWS RRMGSHYQRS ATYVQTDLPA WRAQLLLGEN
STSSEFFDAV SFRGVQLSSD DRMLPDSLRY YAPVVRGTAS TNARVSVYQR GYLIYETTVA
PGAFALDELQ TASYGGDLEV RVTEASGEVR SFIVPFATTV QLLRPGTTRY SLTAGRLNDP
SLERRPNMLQ GVYQRGLGND VTAYAGGAFT GSYMSGLMGA ALNTPVGGFS GDVTLARTEV
PGDDRLSGSS YRLAYSKNLP NTGTNFSLLA YRYSTGGYLG LRDAAFMQDR VERGEPLESF
SRLRNRLDAN ISQQLGNGGN LYLNGSSQRY WSGGGRAVNF SVGYSNQWRD VSYSISAQRL
RSHYEGFSSG DKRGETSTLF SLNLSIPLGG AGRGSPTLSS YLTRDSNSGT QLTSGVSGML
GKRGEASYSL SASHDRDSRQ TSKSASLDYR LPQVELGSSL SQGPGYRQLS VKAAGGLVAH
SGGITAAQTL GETIGLVHAP NARGAGAGYS GSRVDRHGYA VIPNLLPYQL NSVDLDPNGM
ADEIELRSSS RNVAPTAGAV VRLDYPTRVA RPLLVDSRMP SGEPLPFAAE VLDAHSGQPV
GAVGQGSRLV LRVEQDRGSV RVRWGNEPQQ QCLVDYALGP RETTPPVLQL ACRPASAADR
ERTL
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