Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_09760 |
Symbol | |
ID | 4382200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 840542 |
End bp | 841270 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639323340 |
Product | GntR family transcriptional regulator |
Protein accession | YP_788929 |
Protein GI | 116052227 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.503807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCC AACCCGACGT CGACTCGAAC AGCGCCGATG CCCCCTTCGA CCGCAAGGCG GTGCTGGGCG ATGCGCTGCG CCGGCGGATC CTGAGCATGG AACTGGCGCC CGGCGCGGTC GTCGACGAAC TCGCCCTGTG CGACGAGTTC GGCCTCTCGC GCCCGCCGGT GCGCGAACTG CTGCGGCAGA TCGCCGCCGA GGGCTACATC GAACTGGAAG CCAACCGTGC GCCGCGCGTC GCGGCCATGA GCCACGACTC GCTGCACGCC TTCTTTCTCG CCGCGCCGCT GATCTACATC GCCACCACAC AACTGGCGGC CACCCATGCC AGCGAAGCGG AGATCGAGAC GCTCAAGGCG ATCCAGGAAG ATTTCCGCAA GGCCATCGAA GAGAAGCATG TGGAAAACCG CGTCATCCAC AACGACGCCT TCCACCTGGA GATCGGCAGG ATGGCCCACA ACGACTACCT CATGCCCAGC CTGCGCCGCT TGCTGATCGA CCATGCGCGG CTGGGCAAGA TCTTCTACCG CCATCCGACC ACCGACGACA TGCAACGCGA CCTGGAACTC GCCTGCGACC AGCACGACCA GATCGTCGAT GCCATCCAGC GGCGCGATCC GGATGCGGCG GCGGACATCG TCCGTGCGCA TTTCGAGCTG TCGCGCCGGC GCATGGCCGA GTACGCGGCG CCGGCCGGAG TGGAGGTGGC GCTGGTCTAC GAGGGTTAG
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Protein sequence | MKAQPDVDSN SADAPFDRKA VLGDALRRRI LSMELAPGAV VDELALCDEF GLSRPPVREL LRQIAAEGYI ELEANRAPRV AAMSHDSLHA FFLAAPLIYI ATTQLAATHA SEAEIETLKA IQEDFRKAIE EKHVENRVIH NDAFHLEIGR MAHNDYLMPS LRRLLIDHAR LGKIFYRHPT TDDMQRDLEL ACDQHDQIVD AIQRRDPDAA ADIVRAHFEL SRRRMAEYAA PAGVEVALVY EG
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